ggKbase home page

sw_6_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 240 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

sw_6_scaffold_1_2
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(93..338)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTU5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38633.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_6_scaffold_1_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(636..1988)
DNA (1353bp) protein (451aa)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3T5_NATM8
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) {ECO:0000313|EMBL:CCQ37191.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
sw_6_scaffold_1_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2074..2856
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IB81_HALRX
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGB16083.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (st
sw_6_scaffold_1_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2896..3159
DNA (264bp) protein (88aa)
peptidoglycan binding protein id=24652789 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH13319.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_6_scaffold_1_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3163..3684)
DNA (522bp) protein (174aa)
Phosphoglycolate phosphatase n=3 Tax=Haloferax RepID=M0F4P4_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CQR49519.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
HAD-superfamily hydrolase, subfamily IA, variant 3
sw_6_scaffold_1_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3684..4811)
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQC4_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EFW93188.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
acyl-CoA dehydrogenase
sw_6_scaffold_1_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4856..5377)
DNA (522bp) protein (174aa)
DNA binding domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRD9_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:ELZ24952.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
DNA binding domain-containing protein
sw_6_scaffold_1_trna_1
unknown

Not on your lists

5483..5567
DNA (85bp)
transferRNA
sw_6_scaffold_1_9
unknown

Not on your lists

comp(5767..6135)
DNA (369bp) protein (123aa)

This feature has no annotations

sw_6_scaffold_1_10
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6233..6793
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G5M5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ66868.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_6_scaffold_1_11
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6787..8925)
DNA (2139bp) protein (713aa)
Putative acylaminoacyl-peptidase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HMA2_9EURY
Putative acylaminoacyl-peptidase {ECO:0000313|EMBL:ELZ84229.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_6_scaffold_1_12
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9050..9400
DNA (351bp) protein (117aa)
hypothetical protein id=24652731 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH13272.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_6_scaffold_1_13
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9561..9887
DNA (327bp) protein (109aa)
Thioredoxin-like protein n=2 Tax=Haloferax RepID=M0H7H1_9EURY
Thioredoxin-like protein {ECO:0000313|EMBL:ELZ84762.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-151
thioredoxin-like protein
sw_6_scaffold_1_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9921..11378)
DNA (1458bp) protein (486aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPM2_NATM8
sw_6_scaffold_1_15
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11475..13313)
DNA (1839bp) protein (613aa)
pccA; propionyl-CoA carboxylase biotin carboxylase component (EC:6.4.1.3)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BWN6_9EURY
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ELZ14828.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" sourc
sw_6_scaffold_1_16
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13405..14979
DNA (1575bp) protein (525aa)
AMP-dependent synthetase and ligase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZNC9_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY87879.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirens
AMP-dependent synthetase and ligase
sw_6_scaffold_1_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14989..15933)
DNA (945bp) protein (315aa)
Triacylglycerol lipase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE3_9EURY
Triacylglycerol lipase {ECO:0000313|EMBL:ELZ26968.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
esterase/lipase
sw_6_scaffold_1_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16015..17604
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00035E88D8
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EMA45070.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
choline dehydrogenase-like flavoprotein
sw_6_scaffold_1_19

Not on your lists

17690..18010
DNA (321bp) protein (107aa)
Ribonuclease R winged-helix domain protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y982_9ARCH
Ribonuclease R winged-helix domain protein {ECO:0000313|EMBL:ESS09356.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_6_scaffold_1_20

Not on your lists

18013..18261
DNA (249bp) protein (83aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=1 Tax=uncultured archaeon A07HN63 RepID=V4YDY2_9ARCH
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ESS09357.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_6_scaffold_1_21

Not on your lists

comp(18258..18494)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLJ2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05595.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_1_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18491..20038)
DNA (1548bp) protein (516aa)
accB_2; acyl-CoA carboxylase 2, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI50273.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50273.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM9_NATPD
sw_6_scaffold_1_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20131..20778
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38816.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_6_scaffold_1_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20987..21655
DNA (669bp) protein (223aa)
ugpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CAI50271.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CAI50271.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Glycerophosphodiester phosphodiesterase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INN1_NATPD
sw_6_scaffold_1_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21759..22727
DNA (969bp) protein (323aa)
nrdB_3; ribonucleoside-diphosphate reductase, beta subunit 3 (EC:1.17.4.1)
Probable ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CAI50308.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CAI50308.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Probable ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INJ5_NATPD
sw_6_scaffold_1_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22813..23955
DNA (1143bp) protein (381aa)
sucC; succinate--CoA ligase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSU8_NATM8
sw_6_scaffold_1_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23952..24827
DNA (876bp) protein (292aa)
sucD; succinate--CoA ligase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4I9_NATM8
sw_6_scaffold_1_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25023..26366)
DNA (1344bp) protein (448aa)
cyc; unspecific monooxygenase (cytochrome P450) (EC:1.14.14.1)
Cytochrome P450 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR83_NATPD
Cytochrome P450 {ECO:0000313|EMBL:CAI49361.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATC
sw_6_scaffold_1_29
unknown

Not on your lists

26499..27149
DNA (651bp) protein (217aa)

This feature has no annotations

Displaying items 1-30 of 240 in total

View Taxonomy