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sw_6_scaffold_203

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_203_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..1295
DNA (1293bp) protein (431aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E505_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ELZ41982.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
hypothetical protein
sw_6_scaffold_203_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1333..2256
DNA (924bp) protein (308aa)
formamidase (EC:3.5.1.49)
Formamidase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWG5_9EURY
Formamidase {ECO:0000313|EMBL:EMA37917.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
sw_6_scaffold_203_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2265..3185)
DNA (921bp) protein (307aa)
Cation diffusion facilitator family transporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3F6_HALMD
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV47628.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_6_scaffold_203_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3267..4619
DNA (1353bp) protein (451aa)
UPF0272 protein C437_16811 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWZ2_HALVA
UPF0272 protein C437_16811 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
hypothetical protein
sw_6_scaffold_203_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4616..5365)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8V2_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14287.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_203_6
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5442..6140
DNA (699bp) protein (233aa)
DNA repair and recombination protein RadB n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P3I8_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:EMA64722.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
radB; DNA repair and recombination protein RadB
sw_6_scaffold_203_7
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6137..6559)
DNA (423bp) protein (141aa)
Pyridoxamine 5-phosphate oxidase family n=3 Tax=Haloferax RepID=D4GQ24_HALVD
Pyridoxamine 5-phosphate oxidase family
Pyridoxamine 5-phosphate oxidase family protein {ECO:0000313|EMBL:ELZ77539.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
sw_6_scaffold_203_8
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

6656..6976
DNA (321bp) protein (107aa)
EMAP domain-containing protein id=18312256 bin=Haloredivivus tax=Haloredivivus
T-RNA-binding domain protein {ECO:0000313|EMBL:EHK01105.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
EMAP domain-containing protein
sw_6_scaffold_203_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7022..7753)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036C631D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47647.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_203_10
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7853..8758
DNA (906bp) protein (302aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000255|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=3 Tax=Haloarcula RepID=PDXS_HALMA
pyridoxal biosynthesis lyase PdxS
sw_6_scaffold_203_11
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8786..9511)
DNA (726bp) protein (242aa)
udp2; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:ADE03095.1}; EC=2.4.2.3 {ECO:0000313|EMBL:ADE03095.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
Uridine phosphorylase n=4 Tax=Haloferax RepID=D4GUE6_HALVD
sw_6_scaffold_203_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9601..10689
DNA (1089bp) protein (363aa)
NADPH dehydrogenase (OLD yellow enzyme); 2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34 1.6.99.1)
NamA family oxidoreductase (Homolog to old yellow enzyme) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF4_NATPD
NamA family oxidoreductase {ECO:0000313|EMBL:CAI50704.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_6_scaffold_203_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10747..12087)
DNA (1341bp) protein (447aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
Glutamyl-tRNA reductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4P1_HALMO
sw_6_scaffold_203_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12084..12731)
DNA (648bp) protein (216aa)
Siroheme synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI1_9EURY
Siroheme synthase {ECO:0000313|EMBL:ELZ24825.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
siroheme synthase
sw_6_scaffold_203_15
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12728..13813)
DNA (1086bp) protein (362aa)
Heme biosynthesis protein NirGH n=2 Tax=Haloferax RepID=L5NYY0_9EURY
Heme biosynthesis protein NirGH {ECO:0000313|EMBL:ELK55333.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
nirGH; heme biosynthesis protein NirGH
sw_6_scaffold_203_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13858..14259)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25480.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_203_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14414..14608)
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain protein n=2 Tax=Halomicrobium RepID=C7NZ93_HALMD
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACV46779.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_6_scaffold_203_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14736..15644
DNA (909bp) protein (303aa)
uppS_1; di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl diphosphate synthase 1 (EC:2.5.1.- 2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND7_NATPD
sw_6_scaffold_203_19
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15757..16062
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BBT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ07753.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_6_scaffold_203_20
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16065..16409
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NIW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA57004.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
Displaying 20 items

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