ggKbase home page

sw_6_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_8_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

643..1059
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYD7_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01068.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_6_scaffold_8_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1163..1450
DNA (288bp) protein (96aa)
Translation initiation factor 1A n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4X2_HALJB
translation initiation factor aIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
sw_6_scaffold_8_3
unknown

Not on your lists

comp(1489..1896)
DNA (408bp) protein (136aa)

This feature has no annotations

sw_6_scaffold_8_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2042..2434
DNA (393bp) protein (131aa)
msrB; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A3Y0_9EURY
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:GAD52324.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiph
sw_6_scaffold_8_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2521..3576)
DNA (1056bp) protein (352aa)
Brp-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNF4_HALJP
Brp-like protein {ECO:0000313|EMBL:EMA33560.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
blh; Brp-like protein-like
sw_6_scaffold_8_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3573..4316)
DNA (744bp) protein (248aa)
crtY; lycopene beta-cyclase (EC:5.5.1.19)
Lycopene cyclase domain protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LBX9_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:EMA31057.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduc
sw_6_scaffold_8_7
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4368..5096)
DNA (729bp) protein (243aa)
Bacteriorhodopsin n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGU1_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELY48735.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
bacteriorhodopsin
sw_6_scaffold_8_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5261..6085
DNA (825bp) protein (275aa)
SAMP-activating enzyme E1 {ECO:0000313|EMBL:CAI48117.1}; EC=2.7.7.- {ECO:0000313|EMBL:CAI48117.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
SAMP-activating enzyme E1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUR3_NATPD
moeB; molybdenum cofactor biosynthesis protein MoeB
sw_6_scaffold_8_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6061..6357)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L030_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA26896.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_6_scaffold_8_10
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6396..6785)
DNA (390bp) protein (130aa)
Mov34-MPN-PAD-1 superfamily protein n=6 Tax=Haloferax RepID=M0FAG6_9EURY
Mov34-MPN-PAD-1 superfamily protein
Mov34-MPN-PAD-1 superfamily protein {ECO:0000313|EMBL:ELZ86854.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrin
sw_6_scaffold_8_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6782..7729)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53868.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
iron ABC transporter substrate-binding protein
sw_6_scaffold_8_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7726..8127)
DNA (402bp) protein (134aa)
MaoC domain-containing protein dehydratase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C493_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELZ17995.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrige
MaoC domain-containing protein dehydratase
sw_6_scaffold_8_13
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8124..8636)
DNA (513bp) protein (171aa)
MaoC domain-containing protein dehydratase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C493_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELZ17995.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrige
MaoC domain-containing protein dehydratase
sw_6_scaffold_8_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8770..10824
DNA (2055bp) protein (685aa)
UvrABC system protein B n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F5N7_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein B
sw_6_scaffold_8_15
unknown

Not on your lists

11046..11219
DNA (174bp) protein (58aa)

This feature has no annotations

sw_6_scaffold_8_16
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11216..11596
DNA (381bp) protein (127aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IK31_9EURY
PilT protein domain-containing protein
sw_6_scaffold_8_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11597..12448
DNA (852bp) protein (284aa)
RimK family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUT5_NATPD
lysine biosynthesis regulator/ribosomal protein S6 modification enzyme (glutaminyl transferase)
RimK family protein {ECO:0000313|EMBL:CAI48095.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_8_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12449..12838)
DNA (390bp) protein (130aa)
Heat shock protein Hsp20 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTS9_9EURY
Heat shock protein Hsp20 {ECO:0000313|EMBL:EFW92008.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
hsp20_1; hsp20-type chaperone
sw_6_scaffold_8_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12895..13908)
DNA (1014bp) protein (338aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNY0_NATM8
sw_6_scaffold_8_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14026..15051
DNA (1026bp) protein (342aa)
Aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) n=1 Tax=Halobacterium sp. DL1 RepID=G4IAD9_9EURY
Aminopeptidase {ECO:0000313|EMBL:AHG02782.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
leucyl aminopeptidase
sw_6_scaffold_8_21
unknown

Not on your lists

comp(15432..16184)
DNA (753bp) protein (251aa)

This feature has no annotations

sw_6_scaffold_8_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17107..17748
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003643EBE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46660.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_8_23
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17819..19108)
DNA (1290bp) protein (430aa)
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GJH3_9EURY
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ELZ71677.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferac
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
sw_6_scaffold_8_24
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19105..20136)
DNA (1032bp) protein (344aa)
Fe2+ transport protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q740_9EURY
Fe2+ transport protein {ECO:0000313|EMBL:ERH02318.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_6_scaffold_8_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20195..21073)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52499.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
cell surface glycoprotein
sw_6_scaffold_8_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21070..21978)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52499.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_6_scaffold_8_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21979..23043)
DNA (1065bp) protein (355aa)
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUL5_9EURY
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ELZ26338.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
fe2+ transport protein
sw_6_scaffold_8_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23102..23296)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMP2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50616.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_8_29
unknown

Not on your lists

23357..24046
DNA (690bp) protein (230aa)

This feature has no annotations

sw_6_scaffold_8_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24065..25036)
DNA (972bp) protein (324aa)
glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M375_9EURY
Glutathione S-transferase {ECO:0000313|EMBL:EMA40146.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
Displaying items 1-30 of 73 in total

View Taxonomy