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sw_6_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 191 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_9_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..220
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INF3_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50350.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_9_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(228..1538)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49960.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hemY; hypothetical protein
sw_6_scaffold_9_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1627..2232
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W9G7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45992.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_6_scaffold_9_4
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2310..3848
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y046_NATM8
PKD domain-containing protein {ECO:0000313|EMBL:AKH98189.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarcha
hypothetical protein
sw_6_scaffold_9_5
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4047..4805
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SU93_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Hal
rne; ribonuclease E Rne
sw_6_scaffold_9_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4967..6139
DNA (1173bp) protein (391aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L493_9EURY
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:EMA27903.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
sw_6_scaffold_9_7
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6323..7030)
DNA (708bp) protein (236aa)
XRE family transcriptional regulator n=2 Tax=Haloferax RepID=M0G6N3_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:ELZ80704.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii
transcriptional regulator
sw_6_scaffold_9_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7170..7655
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHA7_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:ESP87776.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
GCN5-like N-acetyltransferase
sw_6_scaffold_9_9
unknown

Not on your lists

7673..8005
DNA (333bp) protein (111aa)

This feature has no annotations

sw_6_scaffold_9_10
unknown

Not on your lists

8002..8184
DNA (183bp) protein (61aa)

This feature has no annotations

sw_6_scaffold_9_11
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8203..9303)
DNA (1101bp) protein (367aa)
Putative DNA methylase n=1 Tax=planctomycete KSU-1 RepID=I3ILH4_9PLAN
Putative DNA methylase {ECO:0000313|EMBL:GAB62569.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
sw_6_scaffold_9_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9344..10036)
DNA (693bp) protein (231aa)
Restriction endonuclease n=1 Tax=Halovirus HGTV-1 RepID=R4TMS2_9VIRU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
sw_6_scaffold_9_13
unknown

Not on your lists

10146..10433
DNA (288bp) protein (96aa)

This feature has no annotations

sw_6_scaffold_9_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10595..10840
DNA (246bp) protein (82aa)
Uncharacterized protein id=24630270 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG92550.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_6_scaffold_9_15
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10976..11548
DNA (573bp) protein (191aa)
Integrase family protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SX23_NATMM
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADD03843.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 430
sw_6_scaffold_9_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11637..11960)
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5U6_9EURY
transcription termination factor Tfs
sw_6_scaffold_9_17
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12002..12481)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJ26_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26598.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_6_scaffold_9_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12478..13161)
DNA (684bp) protein (228aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2Z9_HALMD
CopG family transcriptional regulator
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ACV47471.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
sw_6_scaffold_9_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13224..14060)
DNA (837bp) protein (279aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT39_NATM8
homolog to KaiC-like transcription regulator
Uncharacterized protein {ECO:0000313|EMBL:CCQ37567.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_9_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14093..15334)
DNA (1242bp) protein (414aa)
IS1341-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRG2_NATM8
IS1341-type transposase
IS1341-type transposase ISNamo25 {ECO:0000313|EMBL:CCQ36808.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
sw_6_scaffold_9_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15500..16462)
DNA (963bp) protein (321aa)
GHMP family kinase (Homolog to beta-ribofuranosylaminobenzene 5'-phosphate synthase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMV0_NATPD
hypothetical protein
GHMP family kinase (Homolog to beta-ribofuranosylaminobenzene 5'-phosphate synthase) {ECO:0000313|EMBL:CAI50556.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
sw_6_scaffold_9_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16560..17039
DNA (480bp) protein (160aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
Ribonuclease P protein component 2 n=1 Tax=Halogranum salarium B-1 RepID=J3JGQ3_9EURY
rnp2; ribonuclease P protein component 2
sw_6_scaffold_9_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17042..17806
DNA (765bp) protein (255aa)
psmA; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000255|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000255|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA
Proteasome subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PSA_NATPD
sw_6_scaffold_9_24
unknown

Not on your lists

17848..18024
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_9_25
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18065..18802
DNA (738bp) protein (246aa)
RNA-associated protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST56_9EURY
RNA-associated protein {ECO:0000313|EMBL:AHG03866.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_9_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18804..19121)
DNA (318bp) protein (106aa)
FUN14 family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWS5_9EURY
FUN14 family protein {ECO:0000313|EMBL:ESP87647.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
hypothetical protein
sw_6_scaffold_9_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19192..19602)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HYF2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ89501.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_6_scaffold_9_28
unknown

Not on your lists

19702..20124
DNA (423bp) protein (141aa)

This feature has no annotations

sw_6_scaffold_9_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20208..21515
DNA (1308bp) protein (436aa)
GTPase HflX n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPI9_NATPD
hflX; GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
sw_6_scaffold_9_30
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21512..21994)
DNA (483bp) protein (161aa)
cyclic pyranopterin monophosphate synthase subunit MoaC (EC:4.1.99.18)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EEE4_9EURY
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1227465 spe
Displaying items 1-30 of 191 in total

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