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sw_6_scaffold_1027

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1027_1

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188..868
DNA (681bp) protein (227aa)
Transcriptional regulator, ArsR family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XSR9_9ARCH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ESS05208.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ArsR family transcriptional regulator
sw_6_scaffold_1027_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(988..1548)
DNA (561bp) protein (187aa)
hypothetical protein id=24641961 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH11952.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_6_scaffold_1027_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2044..4314)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S272_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63469.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_6_scaffold_1027_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4316..4855)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISD4_NATPD
hypothetical protein
DUF162 family protein {ECO:0000313|EMBL:CAI48953.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_6_scaffold_1027_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5162..5362)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87816.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_6_scaffold_1027_6
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5738..6292
DNA (555bp) protein (185aa)
Histidine triad (HIT) protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BBA9_9EURY
Histidine triad (HIT) protein {ECO:0000313|EMBL:ELZ07563.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
HIT family hydrolase
sw_6_scaffold_1027_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6352..7335
DNA (984bp) protein (328aa)
Cation diffusion facilitator family transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M888_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EMA40610.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
cation diffusion facilitator family transporter
sw_6_scaffold_1027_8
unknown

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8019..8453
DNA (435bp) protein (145aa)

This feature has no annotations

sw_6_scaffold_1027_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8521..9573)
DNA (1053bp) protein (351aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMV6_HALBP
Sodium ABC transporter permease {ECO:0000313|EMBL:ELZ26471.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
sodium ABC transporter permease
sw_6_scaffold_1027_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9566..11392)
DNA (1827bp) protein (609aa)
ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CT84_9EURY
ABC transporter permease {ECO:0000313|EMBL:ELZ26470.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
ABC transporter permease
sw_6_scaffold_1027_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11389..12420)
DNA (1032bp) protein (344aa)
Multidrug ABC transporter ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3JI29_9EURY
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EJN61514.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
trp5; ABC transporter ATP-binding protein
sw_6_scaffold_1027_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12642..12878)
DNA (237bp) protein (79aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL32_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ36986.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_6_scaffold_1027_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13194..13601
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2P6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50965.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_1027_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14141..14917
DNA (777bp) protein (259aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=24615497 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ESP87042.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ESP87042.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
3-oxoacyl-ACP reductase
sw_6_scaffold_1027_15
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14989..16308
DNA (1320bp) protein (440aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000313|EMBL:ACV12609.1}; EC=5.3.1.5 {ECO:0000313|EMBL:ACV12609.1};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;"
Xylose isomerase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMH0_HALUD
sw_6_scaffold_1027_16
unknown

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comp(16424..16600)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_1027_17
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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comp(16600..17361)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000374661F
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=Caldatribacterium saccharofermentans
binding-protein-dependent transport systems inner membrane component
Displaying 17 items

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