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sw_6_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_124_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(235..1290)
DNA (1056bp) protein (352aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IFW1_9EURY
Sugar transporter {ECO:0000313|EMBL:AHG03516.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
major facilitator superfamily protein
sw_6_scaffold_124_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1251..2276)
DNA (1026bp) protein (342aa)
hpcE; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:4.1.1.-) id=24616604 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase {ECO:0000313|EMBL:ESP87466.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
sw_6_scaffold_124_3
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2426..3181)
DNA (756bp) protein (252aa)
Glucose fructose oxidoreductase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JFL7_9EURY
Glucose fructose oxidoreductase {ECO:0000313|EMBL:EMA06470.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans A
oxidoreductase domain protein
sw_6_scaffold_124_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3168..3470)
DNA (303bp) protein (101aa)
Oxidoreductase domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX0_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ24941.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
glucose fructose oxidoreductase
sw_6_scaffold_124_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3584..4717)
DNA (1134bp) protein (378aa)
Altronate dehydratase-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXJ6_9EURY
Altronate dehydratase-like protein {ECO:0000313|EMBL:ELZ27946.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
Altronate dehydratase-like protein
sw_6_scaffold_124_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4714..5037)
DNA (324bp) protein (108aa)
Altronate hydrolase n=2 Tax=Halarchaeum acidiphilum RepID=U2YFL7_9EURY
Altronate hydrolase {ECO:0000313|EMBL:GAD52846.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
garD; dehydratase
sw_6_scaffold_124_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5070..6275)
DNA (1206bp) protein (402aa)
Altronate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN8_9EURY
Altronate dehydratase {ECO:0000313|EMBL:EMA48175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
hypothetical protein
sw_6_scaffold_124_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6712..7482
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZH5_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ15482.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
IclR family transcriptional regulator
sw_6_scaffold_124_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7781..9481
DNA (1701bp) protein (567aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XN57_9EURY
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ELY63175.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_6_scaffold_124_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9551..10477)
DNA (927bp) protein (309aa)
Dihydrodipicolinate synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8U6_9EURY
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EMA54311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dihydrodipicolinate synthetase
sw_6_scaffold_124_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10664..11485
DNA (822bp) protein (274aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J3JHA2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EJN60814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NAD-dependent epimerase/dehydratase
sw_6_scaffold_124_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11770..12378
DNA (609bp) protein (203aa)
hpcH; HpcH/HpaI aldolase family protein (EC:4.1.3.-)
HpcH/HpaI aldolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG9_9EURY
Aldolase {ECO:0000313|EMBL:AHG02996.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_6_scaffold_124_13
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12442..13818
DNA (1377bp) protein (459aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000312A213
ABC transporter substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CDY75667.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathe
sw_6_scaffold_124_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13815..14144
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY74_AZOBR
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIB15374.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
sw_6_scaffold_124_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14141..15874)
DNA (1734bp) protein (578aa)
Transporter, major facilitator family subfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB30_9EURY
Transporter, major facilitator family subfamily protein {ECO:0000313|EMBL:EMA54309.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
transporter, major facilitator family subfamily
sw_6_scaffold_124_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15928..17007
DNA (1080bp) protein (360aa)
Amidohydrolase 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFE5_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EMA56546.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
amidohydrolase 2
sw_6_scaffold_124_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17010..17375
DNA (366bp) protein (122aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP02_9EURY
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:ELY63287.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natr
Rieske (2Fe-2S) iron-sulfur domain protein
sw_6_scaffold_124_18
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17428..18894)
DNA (1467bp) protein (489aa)
glutamyl-tRNA amidotransferase subunit A id=24625673 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERG97781.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
glutamyl-tRNA amidotransferase subunit A
sw_6_scaffold_124_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18949..20115)
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXI8_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27930.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing protein
sw_6_scaffold_124_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20181..21092)
DNA (912bp) protein (304aa)
Gluconolactonase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IHR7_9EURY
gnl; gluconolactonase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
gnl; gluconolactonase
sw_6_scaffold_124_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21380..22339)
DNA (960bp) protein (320aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58761.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_6_scaffold_124_22
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22454..23170)
DNA (717bp) protein (239aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:AKH98026.1}; EC=4.1.1.68 {ECO:0000313|EMBL:AKH98026.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase n=2 Tax=Haloferax RepID=M0IKL0_9EURY
2-hydroxyhepta-24-diene-1,7-dioate isomerase
sw_6_scaffold_124_23
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23397..24335)
DNA (939bp) protein (313aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A2M0_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELY92102.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natria
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
sw_6_scaffold_124_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24558..25376)
DNA (819bp) protein (273aa)
2,5-didehydrogluconate reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYG3_9EURY
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ELZ27668.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
aldo/keto reductase
sw_6_scaffold_124_25
unknown

Not on your lists

comp(25449..25553)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_6_scaffold_124_26
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25797..26588
DNA (792bp) protein (264aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY69896.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELY69896.1};; Uncharacterized protein {ECO:0000313|EMBL:AFZ72956.1}; TaxID=797304 species="Arc
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGK6_NATGS
dehydrogenase
sw_6_scaffold_124_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26691..28232)
DNA (1542bp) protein (514aa)
ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1B5_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ27939.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
TonB-dependent receptor plug
sw_6_scaffold_124_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28363..29682)
DNA (1320bp) protein (440aa)
SAF domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCD5_9EURY
SAF domain-containing protein {ECO:0000313|EMBL:EMA54764.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
dihydrodipicolinate reductase
sw_6_scaffold_124_29

Not on your lists

comp(29811..30914)
DNA (1104bp) protein (368aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YLY5_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_6_scaffold_124_30
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30948..31751)
DNA (804bp) protein (268aa)
Amidase {ECO:0000313|EMBL:ELZ20967.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ELZ20967.1};; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Hal
Amidase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CF33_9EURY
amidase
Displaying items 1-30 of 42 in total

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