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sw_6_scaffold_1245

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1245_1
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

177..326
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:ELK55727.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
sw_6_scaffold_1245_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(327..2411)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46296.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_1245_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2567..3376)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60244.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_1245_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3517..3687
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0J3G0_HALMT
Uncharacterized protein {ECO:0000313|EMBL:ELZ95193.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_6_scaffold_1245_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3813..4034
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MB16_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42977.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_6_scaffold_1245_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4215..4673)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N641_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53402.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_1245_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4919..6121)
DNA (1203bp) protein (401aa)
NMD3 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5H4_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA40653.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
NMD3 family protein
sw_6_scaffold_1245_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6201..6692)
DNA (492bp) protein (164aa)
UDP-glucose 4-epimerase n=1 Tax=Halogranum salarium B-1 RepID=J3A391_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EJN59833.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
UDP-glucose 4-epimerase
sw_6_scaffold_1245_9
unknown

Not on your lists

6809..7015
DNA (207bp) protein (69aa)

This feature has no annotations

sw_6_scaffold_1245_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7180..8100
DNA (921bp) protein (307aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
htpX1; heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Haloarcula japonica DSM 6131 PF0_HALJP">RepID=M0LPF0_HALJP
sw_6_scaffold_1245_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8097..8459
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MB41_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42971.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_6_scaffold_1245_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8506..9111
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53764.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_1245_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9325..10359
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N861_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
radA; DNA repair and recombination protein RadA
sw_6_scaffold_1245_14
unknown

Not on your lists

comp(10536..10682)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_6_scaffold_1245_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10870..12246
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Y2_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:EMA39790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
aldehyde dehydrogenase
sw_6_scaffold_1245_16
unknown

Not on your lists

comp(12354..12449)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_6_scaffold_1245_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12639..12791
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=2 Tax=Halobacteriaceae RepID=F8DBV1_HALXS
50S ribosomal protein L39
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
sw_6_scaffold_1245_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12791..13681
DNA (891bp) protein (297aa)
Translation initiation factor 6 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN11_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor IF-6
sw_6_scaffold_1245_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13711..14028)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55076.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_1245_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14032..14307)
DNA (276bp) protein (92aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG42_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ22240.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
transcriptional regulator
sw_6_scaffold_1245_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14695..14889
DNA (195bp) protein (65aa)
50S ribosomal protein L18Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=RL18A_HALUD
50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=1033806 s
sw_6_scaffold_1245_22

Not on your lists

14886..15392
DNA (507bp) protein (169aa)
Prefoldin subunit alpha n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TXY5_9EURY
Prefoldin, alpha subunit {ECO:0000313|EMBL:AGF93643.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
pfdA; prefoldin subunit alpha
sw_6_scaffold_1245_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15397..16695
DNA (1299bp) protein (433aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI4_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
ftsY; signal recognition particle receptor SRalpha
sw_6_scaffold_1245_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16889..17425
DNA (537bp) protein (179aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAL3_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA42791.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
membrane-bound metal-dependent hydrolase
sw_6_scaffold_1245_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17498..18907
DNA (1410bp) protein (470aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE7_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Signal recognition 54 kDa protein
sw_6_scaffold_1245_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19026..19487
DNA (462bp) protein (154aa)
MgtE integral membrane region n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQI1_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA12151.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_6_scaffold_1245_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19588..20184
DNA (597bp) protein (199aa)
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAH0_9EURY
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein {ECO:0000313|EMBL:EMA42787.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
mgtE1; Mg2+ transporter
Displaying 27 items

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