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sw_6_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_133_1
unknown

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194..400
DNA (207bp) protein (69aa)

This feature has no annotations

sw_6_scaffold_133_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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388..1047
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46265.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_133_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1358..2170)
DNA (813bp) protein (271aa)
Sporulation regulator-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N897_9EURY
Sporulation regulator-like protein {ECO:0000313|EMBL:EMA53334.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
pai2; sporulation regulator-like protein
sw_6_scaffold_133_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2167..3351)
DNA (1185bp) protein (395aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1227455 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRK0_9EURY
sw_6_scaffold_133_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3583..4695
DNA (1113bp) protein (371aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS3_HALBP
amino acid/amide ABC transporter membrane protein 1, haat family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ADQ66860.1}; Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:ELY30368.1}; TaxID=46
sw_6_scaffold_133_6
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4692..6146
DNA (1455bp) protein (485aa)
Putative branched-chain amino acids ABC transporter permease n=4 Tax=Haloferax RepID=M0H2N3_HALL2
Putative branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ86427.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
livM4; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_6_scaffold_133_7
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6139..7086
DNA (948bp) protein (316aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IFI3_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ94229.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofe
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_6_scaffold_133_8
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7083..7907
DNA (825bp) protein (275aa)
ABC transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS0_HALBP
branched-chain amino acid ABC transporter ATPase
ABC transporter {ECO:0000313|EMBL:ELY30365.1}; ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ADQ66857.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
sw_6_scaffold_133_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8529..9914)
DNA (1386bp) protein (462aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LM48_HALWC
livJ4; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC41168.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteri
sw_6_scaffold_133_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10075..10635)
DNA (561bp) protein (187aa)
Putative signal transduction protein with CBS domains n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZH0_HALMD
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACV48738.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sou
sw_6_scaffold_133_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10876..11649)
DNA (774bp) protein (258aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV6_9EURY
sw_6_scaffold_133_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11814..12833)
DNA (1020bp) protein (340aa)
Methyltransferase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9L5_9EURY
Methyltransferase family protein {ECO:0000313|EMBL:EMA53345.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
hypothetical protein
sw_6_scaffold_133_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12820..14007)
DNA (1188bp) protein (396aa)
gth4; probable glycosyltransferase, type 1 (EC:2.4.-.-)
Glycosyl transferase group 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRW4_9EURY
Glycosyl transferase group 1 {ECO:0000313|EMBL:EMA47200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
sw_6_scaffold_133_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14021..14410)
DNA (390bp) protein (130aa)
6-pyruvoyltetrahydropterin synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9B4_HALJB
6-pyruvoyltetrahydropterin synthase
6-pyruvoyltetrahydropterin synthase {ECO:0000313|EMBL:ADJ16383.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
sw_6_scaffold_133_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14745..14984
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A342_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59753.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_133_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15096..17003)
DNA (1908bp) protein (636aa)
ABC-type transport system ATP-binding/permease protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYP9_NATM8
ABC-type transport system ATP-binding/permease protein
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:CCQ35248.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sou
sw_6_scaffold_133_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17199..18068
DNA (870bp) protein (290aa)
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT46_9EURY
nucleolar protein-like protein
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein {ECO:0000313|EMBL:EMA47919.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_6_scaffold_133_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18065..18727
DNA (663bp) protein (221aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobac
fib; fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (EC:2.1.1.-)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N153_9EURY
sw_6_scaffold_133_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18850..19929
DNA (1080bp) protein (360aa)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS {ECO:0000255
Carboxylate-amine ligase NP_3372A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CAAL_NATPD
carboxylate-amine ligase
sw_6_scaffold_133_20
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19939..20805
DNA (867bp) protein (289aa)
Transcriptional regulator TrmB n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LH83_9EURY
Transcriptional regulator TrmB {ECO:0000313|EMBL:EMA32438.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
sw_6_scaffold_133_21
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21016..21507
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:ELZ36187.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELZ36187.1};; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Phosphopantetheine adenylyltransferase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPN2_9EURY
phosphopantetheine adenylyltransferase
sw_6_scaffold_133_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21639..21947)
DNA (309bp) protein (103aa)
Transcription initiation factor TFB 4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE39_9EURY
tfbA_4; transcription initiation factor TFB 4
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA55828.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
sw_6_scaffold_133_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22046..22627
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45206.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_133_trna_1
unknown

Not on your lists

22688..22772
DNA (85bp)
transferRNA
sw_6_scaffold_133_24
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23052..23558)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3V9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16117.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_6_scaffold_133_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23974..24714)
DNA (741bp) protein (247aa)
Putative restriction/modification enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA53191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
N-6 DNA Methylase/Eco57I restriction endonuclease
sw_6_scaffold_133_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24863..25360)
DNA (498bp) protein (166aa)
Putative restriction/modification enzyme (Fragment) n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPL0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA09914.1}; Flags: Fragment;; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
putative restriction/modification enzyme
sw_6_scaffold_133_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25786..26226)
DNA (441bp) protein (147aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2V5_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EMA51449.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
sw_6_scaffold_133_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26389..26955
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_133_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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27045..28043
DNA (999bp) protein (333aa)
adh; alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1] id=24616548 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Alcohol dehydrogenase {ECO:0000313|EMBL:ESP87524.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
alcohol dehydrogenase
Displaying items 1-30 of 46 in total

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