ggKbase home page

sw_6_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_141_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1550)
DNA (1548bp) protein (516aa)
Probable cobyric acid synthase n=2 Tax=Halobiforma lacisalsi RepID=M0LC90_9EURY
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
Cobyric acid synthase
sw_6_scaffold_141_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1718..2983
DNA (1266bp) protein (422aa)
Pyrrolo-quinoline quinone n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZE8_NATMM
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ADD04282.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43
sw_6_scaffold_141_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3634..4389)
DNA (756bp) protein (252aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6P9_HALXS
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:AEH37791.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger
sw_6_scaffold_141_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4437..5312)
DNA (876bp) protein (292aa)
adenosylcobinamide hydrolase (EC:3.5.1.90)
Adenosylcobinamide amidohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N998_9EURY
Adenosylcobinamide amidohydrolase {ECO:0000313|EMBL:EMA53230.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
sw_6_scaffold_141_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5305..6348)
DNA (1044bp) protein (348aa)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9C1_HALXS
L-threonine-O-3-phosphate decarboxylase
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:AEH36857.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduens
sw_6_scaffold_141_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6437..7243)
DNA (807bp) protein (269aa)
GTP:adenosylcobinamide-phosphateguanylyltransfer ase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6P3_9EURY
GTP:adenosylcobinamide-phosphateguanylyltransfer ase {ECO:0000313|EMBL:EMA53228.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
cobY; GTP:adenosylcobinamide-phosphate guanylyltransferase
sw_6_scaffold_141_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7243..8022)
DNA (780bp) protein (260aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
cobS; cobalamin 5-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ICA3_9EURY
sw_6_scaffold_141_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8019..9203)
DNA (1185bp) protein (395aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Halobacterium sp. DL1 RepID=G4IIE1_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
cobalamin biosynthesis protein CobD
sw_6_scaffold_141_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9185..9826)
DNA (642bp) protein (214aa)
HAD superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8V5_9EURY
HAD superfamily hydrolase {ECO:0000313|EMBL:ELZ30574.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_6_scaffold_141_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10130..10363
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTD3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67211.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_6_scaffold_141_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10363..11295
DNA (933bp) protein (311aa)
hypothetical protein id=24621917 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH00317.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_6_scaffold_141_12
unknown

Not on your lists

11516..12091
DNA (576bp) protein (192aa)

This feature has no annotations

sw_6_scaffold_141_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11992..13188)
DNA (1197bp) protein (399aa)
xaa-pro aminopeptidase id=24615945 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
xaa-pro aminopeptidase
sw_6_scaffold_141_14
unknown

Not on your lists

13244..13693
DNA (450bp) protein (150aa)

This feature has no annotations

sw_6_scaffold_141_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13857..14318)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0I7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51043.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_141_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14455..15444)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWE3_HALMD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV46284.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
sw_6_scaffold_141_trna_1
unknown

Not on your lists

comp(15619..15692)
DNA (74bp)
transferRNA
sw_6_scaffold_141_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15959..16504
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49863.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_141_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16730..16936
DNA (207bp) protein (69aa)
Putative transcriptional regulator, CopG family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMD4_HALUD
transcriptional regulator, CopG family
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ACV12573.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
sw_6_scaffold_141_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16940..18130
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG5_HALMD
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
sw_6_scaffold_141_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18349..19350)
DNA (1002bp) protein (334aa)
N-type ATP pyrophosphatase superfamily protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7X2_9EURY
N-type ATP pyrophosphatase superfamily protein {ECO:0000313|EMBL:EMA54017.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
PP-loop domain protein
sw_6_scaffold_141_21
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19496..20644)
DNA (1149bp) protein (383aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTJ4_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY40312.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
glycoside hydrolase 15-like protein
sw_6_scaffold_141_22
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20662..21525)
DNA (864bp) protein (288aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3E5_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA28102.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
glycoside hydrolase 15-like protein
sw_6_scaffold_141_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21745..23742)
DNA (1998bp) protein (666aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBD2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA53970.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycosyl hydrolase, glucoamylase
sw_6_scaffold_141_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24118..24780
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_141_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24921..25190
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43336.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_141_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25204..26061)
DNA (858bp) protein (286aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBW2_9EURY
DNA-(apurinic or apyrimidinic site) lyase
sw_6_scaffold_141_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26089..26922
DNA (834bp) protein (278aa)
Peroxiredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D512_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELZ29938.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
peroxiredoxin
sw_6_scaffold_141_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26919..27578
DNA (660bp) protein (220aa)
Peroxiredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A5Y4_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EJN60893.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peroxiredoxin
sw_6_scaffold_141_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27669..28487)
DNA (819bp) protein (273aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZL8_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA49870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
Displaying items 1-30 of 48 in total

View Taxonomy