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sw_6_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_171_1
unknown

Not on your lists

358..486
DNA (129bp) protein (43aa)

This feature has no annotations

sw_6_scaffold_171_2
unknown

Not on your lists

544..804
DNA (261bp) protein (87aa)

This feature has no annotations

sw_6_scaffold_171_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

857..1438
DNA (582bp) protein (194aa)
Sodium/proton antiporter, cpa1 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDW3_9EURY
Sodium/proton antiporter, cpa1 family protein {ECO:0000313|EMBL:EMA55284.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
kefC; potassium transport protein kefC
sw_6_scaffold_171_4
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1565..2062
DNA (498bp) protein (166aa)
Trk potassium uptake system protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DL84_9EURY
Trk potassium uptake system protein {ECO:0000313|EMBL:ELZ36266.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharo
trkA1; Trk potassium uptake system protein
sw_6_scaffold_171_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2028..2177
DNA (150bp) protein (50aa)
Trk potassium uptake system protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0K9X0_HALAR
Trk potassium uptake system protein {ECO:0000313|EMBL:EMA17991.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arge
potassium transporter Trk
sw_6_scaffold_171_6
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2266..2445)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY79815.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_6_scaffold_171_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2462..3616)
DNA (1155bp) protein (385aa)
Cation transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCH9_9EURY
Cation transporter {ECO:0000313|EMBL:ELZ32452.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
trkH1; potassium transport system protein trkH1
sw_6_scaffold_171_8
unknown

Not on your lists

3937..4146
DNA (210bp) protein (70aa)

This feature has no annotations

sw_6_scaffold_171_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4283..4438
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7KXQ8_NATPD
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCI69583.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
small CPxCG-related zinc finger protein
sw_6_scaffold_171_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4445..5116
DNA (672bp) protein (224aa)
DNA binding domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7H4_HALJB
DNA binding domain-containing protein
DNA binding domain-containing protein {ECO:0000313|EMBL:ADJ14069.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_6_scaffold_171_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5171..5893)
DNA (723bp) protein (241aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_6_scaffold_171_12
unknown

Not on your lists

comp(5895..5990)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_6_scaffold_171_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6070..6744)
DNA (675bp) protein (225aa)
DNA binding domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC97_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA55466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
DNA binding domain-containing protein
sw_6_scaffold_171_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6957..7250
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0N4Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52922.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_171_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7267..8163
DNA (897bp) protein (299aa)
Formate/nitrite transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNN3_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA46973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
formate/nitrite transporter
sw_6_scaffold_171_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8282..8554
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_6_scaffold_171_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8527..8865
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36694.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_6_scaffold_171_18
unknown

Not on your lists

comp(8942..9097)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_6_scaffold_171_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9372..9527
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M258_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
small CPxCG-related zinc finger protein
sw_6_scaffold_171_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9531..10205
DNA (675bp) protein (225aa)
DNA binding domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGW1_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EJN60474.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA binding domain-containing protein
sw_6_scaffold_171_21
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10662..11036
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82812.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_6_scaffold_171_22
unknown

Not on your lists

comp(11080..11295)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_6_scaffold_171_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11475..12122
DNA (648bp) protein (216aa)
gluconate dehydratase (EC:4.2.1.39)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY63_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA50667.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
sw_6_scaffold_171_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12170..12655
DNA (486bp) protein (162aa)
Gluconate dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J2ZKQ2_9EURY
Gluconate dehydratase {ECO:0000313|EMBL:EJN61295.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Mandelate racemase/muconate lactonizing protein
sw_6_scaffold_171_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12713..13093)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_6_scaffold_171_26
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13188..14126
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01992.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_6_scaffold_171_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14854..16623)
DNA (1770bp) protein (590aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
sw_6_scaffold_171_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17042..18478)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
sw_6_scaffold_171_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18711..19838)
DNA (1128bp) protein (376aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E9L7_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ43094.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
sw_6_scaffold_171_30
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20405..21805
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZKR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61310.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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