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sw_6_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_211_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

638..1048
DNA (411bp) protein (137aa)
Ferredoxin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2B2_9EURY
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KDS90397.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
sw_6_scaffold_211_2
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1078..2013)
DNA (936bp) protein (312aa)
RNA methylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJV0_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ22918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
RNA methylase
sw_6_scaffold_211_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2260..2835
DNA (576bp) protein (192aa)
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
sw_6_scaffold_211_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3035..3511
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30033.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
endoribonuclease L-PSP
sw_6_scaffold_211_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3546..3917
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7S8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53608.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_211_6
unknown

Not on your lists

comp(4009..4134)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_6_scaffold_211_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4217..5062)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX64_9EURY
ATP phosphoribosyltransferase
sw_6_scaffold_211_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5251..5448)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48403.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_6_scaffold_211_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5571..6278)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42762.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_211_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7140..8513
DNA (1374bp) protein (458aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN27_9EURY
amidohydrolase
sw_6_scaffold_211_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8559..8948)
DNA (390bp) protein (130aa)
MaoC domain protein dehydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J662_HALJB
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADJ15780.1}; MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELY37196.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Hal
sw_6_scaffold_211_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9062..10327
DNA (1266bp) protein (422aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU5_9EURY
sw_6_scaffold_211_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10440..10970
DNA (531bp) protein (177aa)
Holliday junction resolvase Hjc {ECO:0000256|HAMAP-Rule:MF_01490}; Short=Hjc {ECO:0000256|HAMAP-Rule:MF_01490};; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_01490};; TaxID=1132509 species="Archaea; Euryarc
Resolvase, Holliday junction-type n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A0_9EURY
Resolvase, Holliday junction-type
sw_6_scaffold_211_14
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11042..11965
DNA (924bp) protein (308aa)
Glyoxalase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JAT0_9EURY
Glyoxalase {ECO:0000313|EMBL:EMA06076.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
sw_6_scaffold_211_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12041..12283
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA52172.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_6_scaffold_211_16

Not on your lists

comp(12330..13097)
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=2 Tax=Archaea RepID=U1QDU7_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS12404.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ssuB; putative sulfonate ABC transporter ATP-binding protein
sw_6_scaffold_211_17
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13088..13876)
DNA (789bp) protein (263aa)
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate) id=24635633 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ERH03471.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_6_scaffold_211_18
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13878..14936)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1NIW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH03470.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
ssuA; putative sulfonate ABC transporter periplasmic substrate-binding protein
sw_6_scaffold_211_19
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15174..16295
DNA (1122bp) protein (374aa)
aspB2; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KGF4_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:AJF26298.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;
sw_6_scaffold_211_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16370..17404)
DNA (1035bp) protein (345aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYT1_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFW90347.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
yfhM; epoxide hydrolase
sw_6_scaffold_211_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17625..18476
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYT5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90351.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_211_22
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18668..18832
DNA (165bp) protein (55aa)
Zinc finger, C2H2 type {ECO:0000313|EMBL:ERH00421.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
sw_6_scaffold_211_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18863..19651)
DNA (789bp) protein (263aa)
Translation-associated GTPase n=1 Tax=Halogranum salarium B-1 RepID=J2ZK87_9EURY
Translation-associated GTPase {ECO:0000313|EMBL:EJN61135.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
gbp5; translation-associated GTPase
sw_6_scaffold_211_24
unknown

Not on your lists

19701..19949
DNA (249bp) protein (83aa)

This feature has no annotations

sw_6_scaffold_211_25
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20064..21005)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X9P3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58156.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
acyltransferase
sw_6_scaffold_211_26
unknown

Not on your lists

comp(21137..21304)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_6_scaffold_211_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21448..21642
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML51_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45459.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_211_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21706..21846)
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EJN60484.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_6_scaffold_211_29
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22020..23231)
DNA (1212bp) protein (404aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPG1_HALMO
peptidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_6_scaffold_211_30
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23361..23822)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27312.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
Displaying items 1-30 of 42 in total

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