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sw_6_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_242_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

221..1309
DNA (1089bp) protein (363aa)
Uncharacterized protein (Fragment) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5L7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52414.1}; Flags: Fragment;; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
hypothetical protein
sw_6_scaffold_242_2
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1276..1566
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AWC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ02273.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_6_scaffold_242_3
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1895..2185
DNA (291bp) protein (97aa)
hypothetical protein id=24634759 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
Uncharacterized protein {ECO:0000313|EMBL:ERH05025.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_6_scaffold_242_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2291..3133)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58483.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
sw_6_scaffold_242_5
unknown

Not on your lists

comp(3325..3477)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_6_scaffold_242_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3737..4363)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XD07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59502.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_6_scaffold_242_7
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4516..5019)
DNA (504bp) protein (168aa)
Amino acid-binding ACT domain-containing protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XUU3_9EURY
Amino acid-binding ACT domain-containing protein {ECO:0000313|EMBL:ELY64398.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natro
amino acid-binding ACT domain protein
sw_6_scaffold_242_8
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5078..5689)
DNA (612bp) protein (204aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000313|EMBL:ELY98142.1}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AJR9_NATA1
sw_6_scaffold_242_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5833..6582)
DNA (750bp) protein (250aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0K8_HALMD
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
sw_6_scaffold_242_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6713..7924
DNA (1212bp) protein (404aa)
Anion permease n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJ92_HALAR
Anion permease {ECO:0000313|EMBL:EMA19885.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282.;
anion permease
sw_6_scaffold_242_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8099..8959)
DNA (861bp) protein (287aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA19_HALJB
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADJ14541.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicocc
sw_6_scaffold_242_12
unknown

Not on your lists

comp(8956..9207)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_6_scaffold_242_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9602..11473)
DNA (1872bp) protein (624aa)
Alkaline phosphatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEU6_9EURY
Alkaline phosphatase {ECO:0000313|EMBL:ELZ33333.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
Alkaline phosphatase
sw_6_scaffold_242_14
unknown

Not on your lists

11774..11950
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_242_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12093..13640
DNA (1548bp) protein (516aa)
Putative NADH dehydrogenase I, F subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH22_9EURY
Putative NADH dehydrogenase I, F subunit {ECO:0000313|EMBL:EMA55950.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
sw_6_scaffold_242_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13759..14733
DNA (975bp) protein (325aa)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ03_9EURY
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein {ECO:0000313|EMBL:EFW90419.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
sw_6_scaffold_242_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14736..17210
DNA (2475bp) protein (825aa)
Formate dehydrogenase subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW11_9EURY
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EMA37651.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
formate dehydrogenase subunit alpha
sw_6_scaffold_242_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17556..17891
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37652.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_6_scaffold_242_19
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18074..18835)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K4H0_9EURY
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39911.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_6_scaffold_242_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19125..19391
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=2 Tax=Haladaptatus paucihalophilus RepID=E7QS85_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=797209
tef1b; translation elongation factor aEF-1 subunit beta
sw_6_scaffold_242_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19772..20731)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P249_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47278.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_242_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


20954..21256
DNA (303bp) protein (101aa)
50S ribosomal protein L21e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ63_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl21e; 50S ribosomal protein L21e
sw_6_scaffold_242_23

Not on your lists

21253..21609
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase, subunit F {ECO:0000313|EMBL:ESS06051.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESS06051.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A0
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit F n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0E3_9ARCH
sw_6_scaffold_242_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21727..22356
DNA (630bp) protein (210aa)
RNA-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2L9_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA38859.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
RNA-binding protein
sw_6_scaffold_242_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22520..23440
DNA (921bp) protein (307aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3A2_9EURY
ksgA; dimethyladenosine transferase
sw_6_scaffold_242_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23437..24285
DNA (849bp) protein (283aa)
mechanosensitive ion channel protein MscS id=24615380 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:ESP87134.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mechanosensitive ion channel protein MscS
sw_6_scaffold_242_27
unknown

Not on your lists

24276..24533
DNA (258bp) protein (86aa)

This feature has no annotations

sw_6_scaffold_242_28
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24530..25144
DNA (615bp) protein (205aa)
HemK-related putative methylase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIJ3_NATP1
Methyltransferase {ECO:0000313|EMBL:AKH98140.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfurir
HemK-related putative methylase
sw_6_scaffold_242_29
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(25160..25636)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U968_DEIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV67607.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (
sw_6_scaffold_242_30
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25793..26797
DNA (1005bp) protein (335aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPA4_HALMO
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EMA47481.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
Displaying items 1-30 of 38 in total

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