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sw_6_scaffold_272

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_272_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..555)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QVD0_9EURY
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHG00299.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii
sw_6_scaffold_272_2
unknown

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630..1028
DNA (399bp) protein (133aa)

This feature has no annotations

sw_6_scaffold_272_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1205..2338
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49454.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_272_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2406..4031)
DNA (1626bp) protein (542aa)
coxA1; cox-type terminal oxidase subunit I (EC:1.9.3.1)
Cytochrome C oxidase subunit I n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MS96_9EURY
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EMA48587.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
sw_6_scaffold_272_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4412..5053
DNA (642bp) protein (214aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6K2_HALXS
bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:AEH36598.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanad
sw_6_scaffold_272_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5204..6562
DNA (1359bp) protein (453aa)
Levansucrase (EC:2.4.1.10)
Levansucrase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH53_9EURY
Levansucrase {ECO:0000313|EMBL:ELZ34027.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
sw_6_scaffold_272_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6669..8897)
DNA (2229bp) protein (743aa)
scrB; sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Halogranum salarium B-1 RepID=J3EV78_9EURY
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EJN58472.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_6_scaffold_272_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9182..9775)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49455.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_272_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10067..10840
DNA (774bp) protein (258aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG6_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA47876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
sw_6_scaffold_272_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10931..11719)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL16_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33119.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
Fe-S oxidoreductase
sw_6_scaffold_272_11
unknown

Not on your lists

11830..12222
DNA (393bp) protein (131aa)

This feature has no annotations

sw_6_scaffold_272_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12249..13028)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60664.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
beta-lactamase
sw_6_scaffold_272_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13120..13398)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AF17_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY62702.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_6_scaffold_272_14
unknown

Not on your lists

comp(13629..13904)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_6_scaffold_272_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14233..16398)
DNA (2166bp) protein (722aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227455 species="Archaea; Euryarchae
DNA topoisomerase 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMY8_9EURY
DNA topoisomerase
sw_6_scaffold_272_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16677..16805)
DNA (129bp) protein (43aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=795797 species="Archaea; Euryarchaeo
sw_6_scaffold_272_17
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17038..17763
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003717DE7
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELZ52423.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distribu
NAD-dependent epimerase/dehydratase
sw_6_scaffold_272_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17812..19335)
DNA (1524bp) protein (508aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV65_9EURY
sw_6_scaffold_272_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19475..20458)
DNA (984bp) protein (328aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZL00_9EURY
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:EJN61405.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
esterase/lipase
sw_6_scaffold_272_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20517..21830
DNA (1314bp) protein (438aa)
Kynureninase {ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|PIRNR:PIRNR038800};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU86_9EURY
Displaying 20 items

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