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sw_6_scaffold_381

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_381_1
unknown

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_6_scaffold_381_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(349..1143)
DNA (795bp) protein (265aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC99_HALMO
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_6_scaffold_381_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1170..2045)
DNA (876bp) protein (292aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1210908 species="
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Halogranum salarium B-1 RepID=J3JH53_9EURY
sw_6_scaffold_381_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2042..3538)
DNA (1497bp) protein (499aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase beta chain n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M309_9EURY
tryptophan synthase subunit beta
sw_6_scaffold_381_5
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3535..4305)
DNA (771bp) protein (257aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=1238427 species="Archaea; E
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Halonotius sp. J07HN6 RepID=U1NUE0_9EURY
sw_6_scaffold_381_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4431..4898
DNA (468bp) protein (156aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KHB6_HALAR
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EMA19225.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
methylated-DNA--protein-cysteine methyltransferase
sw_6_scaffold_381_7
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5320..5820)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZJY7_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELY85887.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 1
acetyltransferase
sw_6_scaffold_381_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5916..6548
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCU2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42225.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_6_scaffold_381_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6877..7278)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
oligopeptide/dipeptide ABC transporter, ATP-binding protein
sw_6_scaffold_381_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7390..7602)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MQG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49046.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_381_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7680..8480)
DNA (801bp) protein (267aa)
Type 12 methyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GSJ6_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ESP88066.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
tRNA(1-methyladenosine) methyltransferase-like methyltransferase
sw_6_scaffold_381_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8477..8914)
DNA (438bp) protein (146aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHF6_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
nac; nascent polypeptide-associated complex protein
sw_6_scaffold_381_13

Not on your lists

comp(9055..9711)
DNA (657bp) protein (219aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
PUA domain containing protein
sw_6_scaffold_381_14
unknown

Not on your lists

10009..10182
DNA (174bp) protein (58aa)

This feature has no annotations

sw_6_scaffold_381_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10278..10775)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHZ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44958.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_381_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11302..12255
DNA (954bp) protein (318aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1495067 specie
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB18_HALXS
dihydrodipicolinate synthase
sw_6_scaffold_381_17
unknown

Not on your lists

comp(12544..12855)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_6_scaffold_381_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12957..13811
DNA (855bp) protein (285aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:EMA44961.1}; EC=2.3.1.117 {ECO:0000313|EMBL:EMA44961.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C4_9EURY
sw_6_scaffold_381_19
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13808..15175
DNA (1368bp) protein (456aa)
Diaminopimelate decarboxylase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B736_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
sw_6_scaffold_381_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15287..16720)
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSU6_HALMO
sw_6_scaffold_381_21
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17012..20119)
DNA (3108bp) protein (1036aa)
Light and oxygen sensing histidine kinase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K1Y0_9EURY
HTR-like protein
Light and oxygen sensing histidine kinase {ECO:0000313|EMBL:EMA14124.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
Displaying 21 items

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