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sw_6_scaffold_415

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_415_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..121)
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:AEM57590.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_6_scaffold_415_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(259..1368)
DNA (1110bp) protein (370aa)
Small GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIK2_9EURY
Small GTP-binding protein {ECO:0000313|EMBL:EMA45193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
drg; GTP-binding protein
sw_6_scaffold_415_3

Not on your lists

1495..1698
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2Y4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS11723.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_6_scaffold_415_4
unknown

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comp(2078..2194)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_415_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2234..2500)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J675_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15793.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_415_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2682..2960
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADM3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
ribosomal protein L44E
sw_6_scaffold_415_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2962..3159
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQ44_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
30S ribosomal protein S27E
sw_6_scaffold_415_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3241..4041
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRG9_9EURY
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA35693.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
eif2A; translation initiation factor IF-2 subunit alpha
sw_6_scaffold_415_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4195..4377
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3A1_HALXS
ribosome biogenesis protein Nop10
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis
sw_6_scaffold_415_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4381..5151
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6N0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29252.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-isopropylmalate dehydratase
sw_6_scaffold_415_11
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5313..8087
DNA (2775bp) protein (925aa)
Serine protease protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2BB51_9PLAN
Serine protease protein {ECO:0000313|EMBL:EMB18888.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eu
hypothetical protein
sw_6_scaffold_415_12
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8138..9640)
DNA (1503bp) protein (501aa)
guaB; IMP dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HC34_9EURY
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
sw_6_scaffold_415_13
unknown

Not on your lists

9798..10064
DNA (267bp) protein (89aa)

This feature has no annotations

sw_6_scaffold_415_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10071..10991
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N733_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52480.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_415_15
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11113..11343
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7C0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE57121.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_6_scaffold_415_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11381..11983)
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKQ2_HALMO
NUDIX hydrolase {ECO:0000313|EMBL:EMA45953.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
NUDIX family hydrolase
sw_6_scaffold_415_17
unknown

Not on your lists

comp(12098..12469)
DNA (372bp) protein (124aa)

This feature has no annotations

sw_6_scaffold_415_18
unknown

Not on your lists

comp(12718..13611)
DNA (894bp) protein (298aa)

This feature has no annotations

sw_6_scaffold_415_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14564..15307
DNA (744bp) protein (248aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELY53803.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ELY53803.1};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WZK8_9EURY
sw_6_scaffold_415_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15499..15990
DNA (492bp) protein (164aa)
MOSC domain containing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S228_HALTV
MOSC domain containing protein
MOSC domain containing protein {ECO:0000313|EMBL:ADB63425.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
sw_6_scaffold_415_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16092..17747)
DNA (1656bp) protein (552aa)
Glycosidase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKJ2_9CYAN
glycosidase
Glycosidase {ECO:0000313|EMBL:AFZ20331.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_6_scaffold_415_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17945..18418)
DNA (474bp) protein (158aa)
Permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ35_9EURY
Permease {ECO:0000313|EMBL:ELZ27149.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
auxin efflux carrier
Displaying 22 items

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