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sw_6_scaffold_546

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_546_1
unknown

Not on your lists

comp(2..229)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_6_scaffold_546_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

343..1110
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003759460
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:ACM57483.1}; Flags: Precursor;; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
sw_6_scaffold_546_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1122..1442
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003759460
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADB60470.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source
sw_6_scaffold_546_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1447..2418
DNA (972bp) protein (324aa)
Amino acid transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW24_HALBP
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:ADQ69244.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_6_scaffold_546_5
unknown

Not on your lists

comp(2903..3016)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_6_scaffold_546_6
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3009..3335)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XUA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65384.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
sw_6_scaffold_546_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3447..5225)
DNA (1779bp) protein (593aa)
OB-fold tRNA/helicase-type nucleic acid binding protein id=24615311 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
OB-fold tRNA/helicase-type nucleic acid binding protein {ECO:0000313|EMBL:ESP87204.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobo
RecJ-like exonuclease with DnaJ-type Zn-finger domain
sw_6_scaffold_546_8
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5341..5685
DNA (345bp) protein (115aa)
id=24654413 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654413 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
sw_6_scaffold_546_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5850..6113)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53933.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_546_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6606..7250)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53929.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_546_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7393..10578
DNA (3186bp) protein (1062aa)
Signal-transducing histidine kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W754_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:ELY44163.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bang
HTR-like protein
sw_6_scaffold_546_12
unknown

Not on your lists

10877..11182
DNA (306bp) protein (102aa)

This feature has no annotations

sw_6_scaffold_546_13
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11212..12192)
DNA (981bp) protein (327aa)
A/G-specific DNA glycosylase (EC:3.2.2.-)
HhH-GPD family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3J5_9EURY
HhH-GPD family protein {ECO:0000313|EMBL:ELZ17238.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
sw_6_scaffold_546_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12319..12645
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWV5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48315.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_546_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12700..13305)
DNA (606bp) protein (202aa)
NUDIX hydrolase family protein (EC:3.6.1.13)
Mut/nudix family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1R9_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA51468.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
sw_6_scaffold_546_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13454..13864)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C8L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57150.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
putative transcriptional regulator
sw_6_scaffold_546_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13870..14097)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58525.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_6_scaffold_546_18
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14667..15449
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFM9_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM04067.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
Displaying 18 items

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