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sw_6_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_55_1
unknown

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_6_scaffold_55_2
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(301..1095)
DNA (795bp) protein (265aa)
Transposase IS4 family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A7N5_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELY94785.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 1
transposase
sw_6_scaffold_55_3
unknown

Not on your lists

1483..1605
DNA (123bp) protein (41aa)

This feature has no annotations

sw_6_scaffold_55_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1602..2393)
DNA (792bp) protein (264aa)
Phosphonates ABC transporter permease protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJW6_9EURY
Phosphonates ABC transporter permease protein {ECO:0000313|EMBL:ELZ97020.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax m
phnD2; phosphonates ABC transporter permease protein
sw_6_scaffold_55_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2390..3202)
DNA (813bp) protein (271aa)
Phosphonates ABC transporter permease protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0K9N2_HALAR
Phosphonates ABC transporter permease protein {ECO:0000313|EMBL:EMA17921.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
phnE; phosphonates ABC transporter permease protein
sw_6_scaffold_55_6
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3204..4037)
DNA (834bp) protein (278aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
Phosphonate ABC transporter ATPase n=3 Tax=Haloferax RepID=M0FIC4_9EURY
phnC2; phosphonates ABC transporter ATP-binding protein
sw_6_scaffold_55_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4088..5251)
DNA (1164bp) protein (388aa)
ABC transporter phosphonate-binding protein n=2 Tax=Haloarcula hispanica RepID=G0HZ14_HALHT
phosphate ABC transporter substrate-binding protein
ABC transporter phosphonate-binding protein {ECO:0000313|EMBL:AEM59065.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_6_scaffold_55_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5944..6435
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWI9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53516.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_6_scaffold_55_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6422..6703
DNA (282bp) protein (94aa)
hypothetical protein id=24613286 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP90222.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_6_scaffold_55_10
unknown

Not on your lists

7992..8342
DNA (351bp) protein (117aa)

This feature has no annotations

sw_6_scaffold_55_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8817..9200
DNA (384bp) protein (128aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDP7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA55214.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
putative transcriptional regulator
sw_6_scaffold_55_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9202..10161
DNA (960bp) protein (320aa)
Permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCB3_9EURY
Permease {ECO:0000313|EMBL:EMA55213.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
permease
sw_6_scaffold_55_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10293..10802)
DNA (510bp) protein (170aa)
Endoribonuclease L-PSP n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKG8_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:EMA44935.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
putative translation initiation inhibitor, yjgF family
sw_6_scaffold_55_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10856..11254
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM9_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EMA44934.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
regulatory protein ArsR
sw_6_scaffold_55_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11247..12410
DNA (1164bp) protein (388aa)
Arsenical-resistance protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA37705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
arsenical-resistance protein
sw_6_scaffold_55_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12424..12891
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS6_9EURY
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EMA44932.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
protein-tyrosine-phosphatase
sw_6_scaffold_55_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12893..13111
DNA (219bp) protein (73aa)
Transposase IS4 family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP75_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELY63347.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
sw_6_scaffold_55_18
unknown

Not on your lists

13189..13347
DNA (159bp) protein (53aa)

This feature has no annotations

sw_6_scaffold_55_19

Not on your lists

13419..14720
DNA (1302bp) protein (434aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEN07014.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEN07014.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=halophilic archaeon DL31 RepID=G2MNN6_9ARCH
sw_6_scaffold_55_20
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14765..15550)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1L0_HALTV
Short-chain dehydrogenase {ECO:0000313|EMBL:KDE57606.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
short-chain dehydrogenase/reductase SDR
sw_6_scaffold_55_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15680..16339
DNA (660bp) protein (220aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
sw_6_scaffold_55_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16456..17628
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH52927.1}; EC=4.2.1.6 {ECO:0000313|EMBL:CCH52927.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
Mandelate racemase/muconate lactonizing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGA2_9BACT
Mandelate racemase
sw_6_scaffold_55_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17866..18597)
DNA (732bp) protein (244aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_6_scaffold_55_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18637..18879
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N744_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53378.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_55_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19433..21202)
DNA (1770bp) protein (590aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6E5_HALJB
thiamine pyrophosphate protein TPP binding domain-containing protein
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:ADJ15863.1}; Thiamine pyrophosphate protein TPP binding domain-containing protein {ECO:0000313|EMBL:ELY37959.1}; TaxID=79579
sw_6_scaffold_55_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21448..22497)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N424_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52611.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_55_27

Not on your lists

comp(22691..23911)
DNA (1221bp) protein (407aa)
Nitrate/nitrite transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPK4_9ARCH
Nitrate/nitrite transporter {ECO:0000313|EMBL:ESS04555.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
narK2; major facilitator superfamily transporter
sw_6_scaffold_55_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24191..25009)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z932_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57140.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alpha/beta hydrolase fold protein
sw_6_scaffold_55_29
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25196..26335
DNA (1140bp) protein (380aa)
Beta-lactamase domain protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7K9_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:ELY70009.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
Zn-dependent hydrolase, glyoxylase
sw_6_scaffold_55_30
unknown

Not on your lists

26415..27083
DNA (669bp) protein (223aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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