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sw_6_scaffold_587

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_587_1
unknown

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1..114
DNA (114bp) protein (38aa)

This feature has no annotations

sw_6_scaffold_587_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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525..2987
DNA (2463bp) protein (821aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4M2_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
sec-independent protein translocase component TatC 1
sw_6_scaffold_587_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3192..3761)
DNA (570bp) protein (190aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP2_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA55338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
membrane-bound metal-dependent hydrolase
sw_6_scaffold_587_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3783..4838)
DNA (1056bp) protein (352aa)
hypothetical protein id=24615246 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
CHRD domain containing protein {ECO:0000313|EMBL:ESP88410.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
parallel beta-helix repeat (two copies)
sw_6_scaffold_587_5
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5112..7625
DNA (2514bp) protein (838aa)
40-residue YVTN family beta-propeller repeat-containing protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AXR9_9BACI
40-residue YVTN family beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat-containing protein {ECO:0000313|EMBL:AGK53246.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillu
sw_6_scaffold_587_6
unknown

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comp(8013..8279)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_6_scaffold_587_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8767..10140)
DNA (1374bp) protein (458aa)
glnA_1; glutamate--ammonia ligase 1 (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glutamine synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ1_NATPD
sw_6_scaffold_587_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10266..10724
DNA (459bp) protein (153aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC83_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EMA55183.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
ArsR family transcriptional regulator
sw_6_scaffold_587_9
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10870..12120
DNA (1251bp) protein (417aa)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AMK9_NATGS
cystathionine beta-lyase/cystathionine gamma-synthase
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AFZ74689.1}; Cystathionine synthase/lyase {ECO:0000313|EMBL:ELY73406.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacte
sw_6_scaffold_587_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12177..14135
DNA (1959bp) protein (653aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=931277 species="Archaea; Eury
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M507_HALMO
sw_6_scaffold_587_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14349..14915)
DNA (567bp) protein (189aa)
Protein N-acetyltransferase-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKH4_9EURY
Protein N-acetyltransferase-like protein {ECO:0000313|EMBL:EMA46187.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
protein N-acetyltransferase-like protein
sw_6_scaffold_587_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14999..15148)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Halococcus RepID=M0MF84_HALMO
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
rpl40e; 50S ribosomal protein L40e
sw_6_scaffold_587_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15208..15840)
DNA (633bp) protein (211aa)
Probable ribosome biogenesis protein C448_08904 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIV7_HALMO
Probable ribosome biogenesis protein C448_08904 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
conserved hypothetical protein (DUF367)
sw_6_scaffold_587_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15976..16302
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M494_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40627.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_587_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16354..18774)
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41540.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_587_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19202..20644)
DNA (1443bp) protein (481aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM22_HALBP
sw_6_scaffold_587_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20894..21775
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1C2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50904.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
collagen triple helix repeat-containing protein
sw_6_scaffold_587_18
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21940..22872
DNA (933bp) protein (311aa)
Beta-lactamase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BJ08_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ10840.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
Zn-dependent hydrolase, glyoxylase
sw_6_scaffold_587_19
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22944..23348
DNA (405bp) protein (135aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28064.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_6_scaffold_587_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23444..24649)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38816.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_6_scaffold_587_21
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24771..25601)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZPD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY88375.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_6_scaffold_587_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25923..27776
DNA (1854bp) protein (618aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND20_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA55756.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
sodium/proton antiporter, cpa1 family
sw_6_scaffold_587_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27923..28654
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_6_scaffold_587_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28728..29654)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_587_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29809..31044
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
sw_6_scaffold_587_26
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31113..31520)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
universal stress protein UspA
sw_6_scaffold_587_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31664..33004)
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
sw_6_scaffold_587_28
unknown

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33157..33432
DNA (276bp) protein (92aa)

This feature has no annotations

sw_6_scaffold_587_29
unknown

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comp(33500..34111)
DNA (612bp) protein (204aa)

This feature has no annotations

sw_6_scaffold_587_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


34179..34832
DNA (654bp) protein (218aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
Displaying items 1-30 of 35 in total

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