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sw_6_scaffold_627

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_627_1
unknown

Not on your lists

comp(39..140)
DNA (102bp) protein (34aa)

This feature has no annotations

sw_6_scaffold_627_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(240..2579)
DNA (2340bp) protein (780aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3S3_HALJB
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADJ13414.1}; DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:ELY32754.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halob
sw_6_scaffold_627_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2735..4153)
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
putative efflux protein, MATE family
sw_6_scaffold_627_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4319..5254
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lip; lipoyl synthase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV42_HALMO
sw_6_scaffold_627_5
unknown

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5729..6244
DNA (516bp) protein (172aa)

This feature has no annotations

sw_6_scaffold_627_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6339..7022)
DNA (684bp) protein (228aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ78_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_6_scaffold_627_7
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7029..7871)
DNA (843bp) protein (281aa)
Putative transcriptional regulator n=2 Tax=Haloferax RepID=M0H4D1_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ELZ79381.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii A
transcriptional regulator
sw_6_scaffold_627_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8328..9125
DNA (798bp) protein (266aa)
TrmB family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU5_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:EMA46698.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
TrmB family transcriptional regulator
sw_6_scaffold_627_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9581..10252
DNA (672bp) protein (224aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator
sw_6_scaffold_627_10
unknown

Not on your lists

10534..11073
DNA (540bp) protein (180aa)

This feature has no annotations

sw_6_scaffold_627_11
unknown

Not on your lists

11164..11940
DNA (777bp) protein (259aa)

This feature has no annotations

sw_6_scaffold_627_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12359..13297
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAD2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA17758.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_6_scaffold_627_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13786..15165
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_627_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15302..16396
DNA (1095bp) protein (365aa)
Glycoside hydrolase family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGA8_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP89755.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
glycoside hydrolase family protein
sw_6_scaffold_627_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16603..17709
DNA (1107bp) protein (369aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJZ3_9EURY
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha {ECO:0000313|EMBL:EMA33856.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobifo
pyruvate dehydrogenase E1 component subunit alpha
sw_6_scaffold_627_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18054..18686
DNA (633bp) protein (211aa)
Transketolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7D0_9EURY
Transketolase {ECO:0000313|EMBL:EMA53014.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
transketolase central subunit
sw_6_scaffold_627_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18686..20323
DNA (1638bp) protein (546aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA43149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
catalytic domain of components of various dehydrogenase complexes
sw_6_scaffold_627_18
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20455..21135
DNA (681bp) protein (227aa)
short-chain family oxidoreductase (EC:1.1.1.-)
Short chain dehydrogenase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDN4_9EURY
Short chain dehydrogenase {ECO:0000313|EMBL:ELZ93968.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512
sw_6_scaffold_627_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21308..21742
DNA (435bp) protein (145aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV34_HALMO
dihydrolipoamide dehydrogenase
Displaying 19 items

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