ggKbase home page

sw_6_scaffold_730

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_730_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

230..499
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MWM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88358.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_6_scaffold_730_2
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(712..2079)
DNA (1368bp) protein (456aa)
Teichoic acid biosynthesis protein RodC related protein n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=O26465_METTH
teichoic acid biosynthesis protein RodC-like protein
Teichoic acid biosynthesis protein RodC related protein {ECO:0000313|EMBL:AAB84871.1}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanoth
sw_6_scaffold_730_3
unknown

Not on your lists

comp(2243..2386)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_6_scaffold_730_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2454..3743)
DNA (1290bp) protein (430aa)
Alcohol dehydrogenase, class IV n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1D1_9EURY
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA38409.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
iron-containing alcohol dehydrogenase
sw_6_scaffold_730_5
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3946..4194)
DNA (249bp) protein (83aa)
hypothetical protein id=24619044 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06456.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_6_scaffold_730_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4434..5897)
DNA (1464bp) protein (488aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWT7_HALMO
3-phosphoshikimate 1-carboxyvinyltransferase
sw_6_scaffold_730_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6183..6542
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20853.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_730_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6599..6964
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLL6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ16616.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_6_scaffold_730_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7105..9756
DNA (2652bp) protein (884aa)
ATP-dependent helicase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VSA0_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:ELY39872.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
DEAD/DEAH box helicase domain protein
sw_6_scaffold_730_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9821..10951)
DNA (1131bp) protein (377aa)
degP; probable periplasmic serine protease (EC:3.4.21.-)
Periplasmic serine proteinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC4_9EURY
Periplasmic serine proteinase {ECO:0000313|EMBL:EMA55079.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_6_scaffold_730_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11196..12446
DNA (1251bp) protein (417aa)
Peptidase M24 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2P0_HALJB
X-Pro aminopeptidase
Peptidase M24 {ECO:0000313|EMBL:ELY34987.1}; X-Pro aminopeptidase {ECO:0000313|EMBL:ADJ14997.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkal
sw_6_scaffold_730_12
unknown

Not on your lists

comp(12519..12929)
DNA (411bp) protein (137aa)

This feature has no annotations

sw_6_scaffold_730_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13154..15076)
DNA (1923bp) protein (641aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9T7_HALJB
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase {ECO:0000313|EMBL:ADJ16426.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalk
sw_6_scaffold_730_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15303..16790
DNA (1488bp) protein (496aa)
Methyltransferase type 12 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N627_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:EMA53387.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
methyltransferase family protein
Displaying 14 items

View Taxonomy