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sw_6_scaffold_85

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_85_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..103
DNA (102bp) protein (34aa)
ATP-NAD/AcoX kinase {ECO:0000313|EMBL:ELZ24323.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
sw_6_scaffold_85_2
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

278..1312
DNA (1035bp) protein (345aa)
Phosphate uptake regulator PhoU n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W2Q1_9EURY
Phosphate uptake regulator PhoU {ECO:0000313|EMBL:ELY43735.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidif
regulatory protein
sw_6_scaffold_85_3
Pundamilia nyererei, Pundamilia, Cichliformes, Neopterygii, Chordata, Metazoa

Not on your lists

1466..2668
DNA (1203bp) protein (401aa)
PREDICTED: mucin-2-like, partial n=1 Tax=Pundamilia nyererei RepID=UPI0003AF6A91
sw_6_scaffold_85_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2698..4134)
DNA (1437bp) protein (479aa)
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ8_9EURY
Dienelactone hydrolase {ECO:0000313|EMBL:AHG04109.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
sw_6_scaffold_85_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4273..5238)
DNA (966bp) protein (322aa)
Transketolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N964_9EURY
Transketolase {ECO:0000313|EMBL:EMA54421.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2-oxoisovalerate dehydrogenase
sw_6_scaffold_85_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5280..6503)
DNA (1224bp) protein (408aa)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ6_9EURY
2-oxoacid dehydrogenase {ECO:0000313|EMBL:AHG04111.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
2-oxo acid dehydrogenase
sw_6_scaffold_85_7
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6918..7322)
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AAV9_9EURY
PilT protein domain-containing protein
sw_6_scaffold_85_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

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7766..8884
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037CF3E5
hypothetical protein Tax=RBG_16_NC10_65_8_curated
mandelate racemase/muconate lactonizing protein
sw_6_scaffold_85_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9083..10099
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA38_HALJB
ketol-acid reductoisomerase
Ketol-acid reductoisomerase {ECO:0000313|EMBL:ADJ14560.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeo
sw_6_scaffold_85_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10270..11043
DNA (774bp) protein (258aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3D5_9EURY
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_6_scaffold_85_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11143..12840
DNA (1698bp) protein (566aa)
Thermosome subunit delta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9L2_9EURY
Thermosome subunit delta {ECO:0000313|EMBL:EMA54268.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
ths_1; thermosome subunit 1 (alpha subunit)
sw_6_scaffold_85_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12964..14541)
DNA (1578bp) protein (526aa)
Thermosome n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8I0_9EURY
Thermosome {ECO:0000313|EMBL:EMA54267.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
thermosome
sw_6_scaffold_85_13
unknown

Not on your lists

14804..14986
DNA (183bp) protein (61aa)

This feature has no annotations

sw_6_scaffold_85_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14938..16161
DNA (1224bp) protein (408aa)
Galactonate dehydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6X8_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:EMA41552.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
galactonate dehydratase
sw_6_scaffold_85_15

Not on your lists

16333..17229
DNA (897bp) protein (299aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
sw_6_scaffold_85_16

Not on your lists

17376..18638
DNA (1263bp) protein (421aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
sw_6_scaffold_85_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18848..20401
DNA (1554bp) protein (518aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8Q8_9EURY
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EMA54266.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
sw_6_scaffold_85_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20552..21499
DNA (948bp) protein (316aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC59_9EURY
Binding-protein-dependent transporter inner membrane component {ECO:0000313|EMBL:EMA54265.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
hypothetical protein
sw_6_scaffold_85_19
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21502..22344
DNA (843bp) protein (281aa)
ABC transporter integral membrane protein n=2 Tax=Haloferax RepID=M0II01_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:ELZ96406.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfu
carbohydrate ABC transporter membrane protein 2, CUT1 family
sw_6_scaffold_85_20
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22547..23719
DNA (1173bp) protein (391aa)
ABC transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JBK3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA06477.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
ABC transporter
sw_6_scaffold_85_21
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

23782..24936
DNA (1155bp) protein (385aa)
Putative galactonate dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I354_CALAS
putative galactonate dehydratase
Putative galactonate dehydratase {ECO:0000313|EMBL:BAL99691.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (str
sw_6_scaffold_85_22

Not on your lists

25132..25998
DNA (867bp) protein (289aa)
Creatininase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8W7_SPHTD
Marine sediment metagenome DNA, contig: S12H4_L00651 {ECO:0000313|EMBL:GAI78609.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Creatininase
Displaying 22 items

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