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sw_6_scaffold_280_25

Organism: SW_6_Halobacteriales_65_23

near complete RP 33 / 55 MC: 3 BSCG 27 / 51 MC: 3 ASCG 38 / 38 MC: 2
Location: comp(23486..24511)

Top 3 Functional Annotations

Value Algorithm Source
Putative mechanosensitive ion channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N161_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 319.0
  • Bit_score: 411
  • Evalue 8.20e-112
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA51288.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 319.0
  • Bit_score: 411
  • Evalue 1.10e-111
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 282.0
  • Bit_score: 358
  • Evalue 1.80e-96

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1026
ATGGTTTCGGTAGCCGCTTTGTTCTCCGTTTTCCTCCAGTCCGCCCCGACCGGTACTTCCGCCGGAAACGGAACGAACGCCTCCGGCGGCGCGGAGGCCGGGACGGCCGTCTCACGGATCGCGAACCCGGCGGAGGTCGGTCCGATCGGCCAGTTCCTCCGCGATCTCGGCGTTCCCTACGCCGCCGTGCTCGGCGCGGCGATCACGTTCCTCGTTGCGTCCGTCCTGTTGTACGCTATCGGCCGAGCGGTGGTCATCCCGCTCGTCCGTCGGGCGCTCGACGTTAGAGGGCTCGGCGATCACGCCAAACGGCCGCTGTTGCGGTTGACACGACTTCTCGTCGGGTTCGTCGCGGTGGCGATCGCGTTCGGGTTCGCCGGCTACGGCAGTATCCTGACCTCGCTCGCGACGATCGGTGCGGCGGCGACGCTCGCGATCGGGTTCGCGCTCCAGGACGTACTCAAGAACTTCGTCTCGGGCGTGTTCATCTACACCGATCGGCCCTTCCGGATCGACGACTGGATCGAGTGGGGCAACGGCGAGTACGCCGGCATCGTCGAGGACATCAGCCTCCGGGTCACTCGGGTCCGGACGTTCGACAACGAGCTGTTGACCGTCCCGAACTCGACGCTCACCGACGGCGTTATCAAGAACCCGGTCGCGTACGGCAAGCTTCGCCTGTCGGTGGGTTTCGGGATCGGTTACGAGGACGACATCGAGCAAGCCATCGAGATCCTCACCGAGGAGGCCGAGCGCCACGAGGTGATCTTGAACGATCCGAGCCCGGTAGTCCATATGAACGACGAGGCACCGCTCGCCGATTCGTATGTCGGCCTCACCGCTCGTATCTGGATCGACGACCCGAGCCGTGGGGACTTCCTCCAGACTCGCGGCGAGTACGTAAAGCGGGTCAAGGCACGCTTCGACGAGGCCGGCATCGACATTCCCTACCCGCAGGTCGATCTCTCCGGTGGTATCGAGCTTACGAATCAACAAACCGTGCCCGTCCGGACGGACGACGACTAG
PROTEIN sequence
Length: 342
MVSVAALFSVFLQSAPTGTSAGNGTNASGGAEAGTAVSRIANPAEVGPIGQFLRDLGVPYAAVLGAAITFLVASVLLYAIGRAVVIPLVRRALDVRGLGDHAKRPLLRLTRLLVGFVAVAIAFGFAGYGSILTSLATIGAAATLAIGFALQDVLKNFVSGVFIYTDRPFRIDDWIEWGNGEYAGIVEDISLRVTRVRTFDNELLTVPNSTLTDGVIKNPVAYGKLRLSVGFGIGYEDDIEQAIEILTEEAERHEVILNDPSPVVHMNDEAPLADSYVGLTARIWIDDPSRGDFLQTRGEYVKRVKARFDEAGIDIPYPQVDLSGGIELTNQQTVPVRTDDD*