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sw_6_scaffold_280

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_280_1
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
CRISPR-associated protein Cas6 n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HIZ1_9EURY
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ELZ84461.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
CRISPR-associated protein Cas6
sw_6_scaffold_280_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(327..1445)
DNA (1119bp) protein (373aa)
Aminoglycoside phosphotransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU81_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EFW92160.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
aminoglycoside phosphotransferase
sw_6_scaffold_280_3
unknown

Not on your lists

comp(1711..2307)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_6_scaffold_280_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2300..2548)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R8Z9_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20709.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_6_scaffold_280_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2667..2969
DNA (303bp) protein (101aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XH59_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY60761.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
acyl-CoA dehydrogenase
sw_6_scaffold_280_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3415..4554)
DNA (1140bp) protein (380aa)
CBS domain-containing membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLE0_9EURY
CBS domain-containing membrane protein {ECO:0000313|EMBL:ELZ23187.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
CBS domain containing membrane protein
sw_6_scaffold_280_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4595..5080
DNA (486bp) protein (162aa)
Lycopene cyclase domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5D4_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:EMA27200.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma la
lycopene cyclase
sw_6_scaffold_280_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5193..5987
DNA (795bp) protein (265aa)
NAD-dependent protein deacetylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N661_9EURY
NAD-dependent protein deacetylase {ECO:0000313|EMBL:EMA53366.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
NAD-dependent protein deacetylase
sw_6_scaffold_280_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6114..6515
DNA (402bp) protein (134aa)
Cupin n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2G9_9EURY
Cupin {ECO:0000313|EMBL:EMA52041.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
cupin
sw_6_scaffold_280_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7018..7266
DNA (249bp) protein (83aa)
Amino acid permease n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR94_NATP1
amino acid transporter
Amino acid permease {ECO:0000313|EMBL:ELY71682.1}; Amino acid transporter {ECO:0000313|EMBL:AGB33313.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Na
sw_6_scaffold_280_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7359..8582
DNA (1224bp) protein (408aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLX7_9EURY
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHG02150.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
sw_6_scaffold_280_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8757..9515)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWC6_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ15265.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_6_scaffold_280_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9753..10892
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWK4_HALBP
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADQ69424.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_6_scaffold_280_14
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11108..12121
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WM01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50417.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
3-hydroxy-3-methylglutaryl CoA synthase
sw_6_scaffold_280_15
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12121..12579
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50416.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
sw_6_scaffold_280_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12576..13751
DNA (1176bp) protein (392aa)
Thiolase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLR1_9EURY
Thiolase {ECO:0000313|EMBL:ELY50415.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 12255
acetyl-CoA acetyltransferase
sw_6_scaffold_280_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14021..14824
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMD8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELY50396.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimn
short-chain dehydrogenase/reductase SDR
sw_6_scaffold_280_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14982..15728)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2K4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14961.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_280_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15825..16844
DNA (1020bp) protein (340aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZV2_9EURY
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:EMA37655.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative photosystem II stability/assembly factor-like protein
sw_6_scaffold_280_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16974..17747
DNA (774bp) protein (258aa)
Thioredoxin reductase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J650_HALJB
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:ADJ15768.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
sw_6_scaffold_280_21
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17808..19490)
DNA (1683bp) protein (561aa)
Spermidine synthase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IGT1_9EURY
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=66
spermine/spermidine synthase family protein
sw_6_scaffold_280_22
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19768..20724
DNA (957bp) protein (319aa)
GTP-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7N0_HALJB
GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:ADJ16050.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
sw_6_scaffold_280_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20712..22316)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37591.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_280_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22439..23056
DNA (618bp) protein (206aa)
GTP-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBN3_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA54070.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
engB; GTP-binding protein EngB
sw_6_scaffold_280_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23486..24511)
DNA (1026bp) protein (342aa)
Putative mechanosensitive ion channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N161_9EURY
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA51288.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
mechanosensitive ion channel protein MscS
sw_6_scaffold_280_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24517..24762)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_280_27
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24807..25091)
DNA (285bp) protein (95aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YAI6_9EURY
RNase P subunit RPR2
sw_6_scaffold_280_28
unknown

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comp(25323..25445)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 28 items

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