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sw_6_scaffold_4443

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_4443_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..240)
DNA (240bp) protein (80aa)
50S ribosomal protein L5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI71_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
rpl5p; 50S ribosomal protein L5P
sw_6_scaffold_4443_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(237..695)
DNA (459bp) protein (153aa)
30S ribosomal protein S4e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTS2_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S4e
sw_6_scaffold_4443_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1007..1363)
DNA (357bp) protein (119aa)
50S ribosomal protein L24P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUX7_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L24
sw_6_scaffold_4443_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1375..1773)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED4_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
rpl14p; 50S ribosomal protein L14P
sw_6_scaffold_4443_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1773..2198)
DNA (426bp) protein (142aa)
30S ribosomal protein S17P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXH6_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA49130.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
rps17p; 30S ribosomal protein S17
sw_6_scaffold_4443_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2205..2492)
DNA (288bp) protein (96aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI66_9EURY
sw_6_scaffold_4443_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2492..2716)
DNA (225bp) protein (75aa)
50S ribosomal protein L29P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTS6_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L29
sw_6_scaffold_4443_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2716..3810)
DNA (1095bp) protein (365aa)
30S ribosomal protein S3 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY3_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
30S ribosomal protein S3e (S3p)
sw_6_scaffold_4443_9
unknown

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3900..4361
DNA (462bp) protein (154aa)

This feature has no annotations

sw_6_scaffold_4443_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4265..4687)
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEG4_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ribosomal protein S19/S15
sw_6_scaffold_4443_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4689..5402)
DNA (714bp) protein (238aa)
50S ribosomal protein L2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU48_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rpl2p; 50S ribosomal protein L2
sw_6_scaffold_4443_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5405..5656)
DNA (252bp) protein (84aa)
50S ribosomal protein L23P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTT0_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L23
sw_6_scaffold_4443_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5653..6195)
DNA (543bp) protein (181aa)
50S ribosomal protein L4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI0_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
50S ribosomal protein L4
sw_6_scaffold_4443_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6206..7315)
DNA (1110bp) protein (370aa)
50S ribosomal protein L3 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEC6_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
LSU ribosomal protein L3P
sw_6_scaffold_4443_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7332..7541)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44116.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_4443_trna_1
unknown

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8242..8312
DNA (71bp)
transferRNA
sw_6_scaffold_4443_16
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8498..8677
DNA (180bp) protein (60aa)
Integrase family protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K489_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA14670.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
Displaying 17 items

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