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sw_6_scaffold_1576_3

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(2623..2844)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 73.0
  • Bit_score: 128
  • Evalue 3.90e-27
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 73.0
  • Bit_score: 128
  • Evalue 3.20e-27
tfbA; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 71.0
  • Bit_score: 99
  • Evalue 5.40e-19

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 222
TTGGACCTCCCGCACGAGATCGAGGCGCGAGCCCGGGAACTCGTCGCCGAGGGCCGTGATCGCGGCGTGATCGGCGGCCGGAATCCGAGCGGGGTGGCCGCGGCCTGTCTCTACACCGCGGCGACCGAACGCGGCCACGCGCTCACCCAAGAGGCGGCCGCCGAAGTCGCGGACGTGACGCCGGTGACGCTCCGGGCGACCTATCAGGAGCTACACGCCTGA
PROTEIN sequence
Length: 74
LDLPHEIEARARELVAEGRDRGVIGGRNPSGVAAACLYTAATERGHALTQEAAAEVADVTPVTLRATYQELHA*