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sw_6_scaffold_1576_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(2786..3475)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 241.0
  • Bit_score: 384
  • Evalue 5.50e-104
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 241.0
  • Bit_score: 384
  • Evalue 7.70e-104
tfbA_7; transcription initiation factor TFB 7 similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 218.0
  • Bit_score: 289
  • Evalue 8.90e-76

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 690
ATGGAATCAAACGGGGTGTGCTCGGAATGTAACGGCCGATTGGTCGCCGTCGATGGGGAGACGACCTGTAGCGACTGTGGTCTCGTCGTCGCGACCGACGAGATCGACCGCGGTCCCGAGTGGCGGTCGTTCGAGCGCGAGACGCGCGAGCGGACCGGCGCGCCGCTGACGCGCTCGCGCCACGACCGCGGCCTCTCGACCGAGATCGGCCGGTCGACACGGCTCACCGGGCGGAAACGCCGGCTGTTCGCGCGACTCCGCCGCCAGCACACCCGCTCGCGGATCGCCTCGAAGGCCGAGCGCAACCGAGTGTACGCCTTCACCGAGATCCGACGGCAAGTCTGTGCGCTCGGACTGTCCGACAGCGTCCGGGATCGCGCCTGCGTGCTGTTCGAGTCGGCCCAGGACGCGGACCTCCTTCGGGGACGCTCGCTCGAAGGCTTCGCGGCCGCGACCCTCTATGCGGTCTGTCGAACCGGCGGTGTCTCGCGCACGCTCGCGGAGATCGTCACGGTCGCGAAGGCCTCGCGTGACGAACTCACGGCTGCGTACGACGCCCTGAACCGCGAACTCGGGCTGCCGACCGGCCCGATCGACCCTACGGAGTATCTCGCGCGAGTTCGCATCGCAGTTGGACCTCCCGCACGAGATCGAGGCGCGAGCCCGGGAACTCGTCGCCGAGGGCCGTGA
PROTEIN sequence
Length: 230
MESNGVCSECNGRLVAVDGETTCSDCGLVVATDEIDRGPEWRSFERETRERTGAPLTRSRHDRGLSTEIGRSTRLTGRKRRLFARLRRQHTRSRIASKAERNRVYAFTEIRRQVCALGLSDSVRDRACVLFESAQDADLLRGRSLEGFAAATLYAVCRTGGVSRTLAEIVTVAKASRDELTAAYDALNRELGLPTGPIDPTEYLARVRIAVGPPARDRGASPGTRRRGP*