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sw_6_scaffold_163

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_163_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..1344
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6347A
cadherin domain-containing protein
Cadherin domain protein {ECO:0000313|EMBL:ABC45714.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_163_2
Neospora caninum, Neospora, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

1355..2758
DNA (1404bp) protein (468aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL68252.1}; TaxID=572307 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora.;" source="N
sw_6_scaffold_163_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2853..3719
DNA (867bp) protein (289aa)
hypothetical protein
hypothetical protein id=24658292 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25491.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_163_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3644..4183)
DNA (540bp) protein (180aa)
oxidoreductase
oxidoreductase id=24658293 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Oxidoreductase, putative {ECO:0000313|EMBL:ABC45116.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_6_scaffold_163_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4319..5491)
DNA (1173bp) protein (391aa)
Chaperone protein DnaJ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT7_SALRM
dnaJ; chaperone protein dnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_6_scaffold_163_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5597..6220)
DNA (624bp) protein (208aa)
grpE; Molecular chaperone GrpE (heat shock protein)
grpE; co-chaperone GrpE; K03687 molecular chaperone GrpE id=24658295 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
sw_6_scaffold_163_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6437..7528)
DNA (1092bp) protein (364aa)
hrcA; heat-inducible transcription repressor HrcA
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=24658296 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
sw_6_scaffold_163_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8000..9805
DNA (1806bp) protein (602aa)
sppA; signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-] id=24658297 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal peptide peptidase SppA, 67K type {ECO:0000313|EMBL:ABC44539.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABC44539.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
sppA; signal peptide peptidase SppA, 67K type
sw_6_scaffold_163_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9844..11415)
DNA (1572bp) protein (524aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU1_SALRM
gpmI; phosphoglyceromutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
sw_6_scaffold_163_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11643..12491)
DNA (849bp) protein (283aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1};; DNA-(apurinic or apyrimidinic site) lyase
Endonuclease III n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU3_SALRM
nth; endonuclease III
sw_6_scaffold_163_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12718..13824
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S024_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44758.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_163_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13912..16185)
DNA (2274bp) protein (758aa)
hypothetical protein id=24658611 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_163_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16388..17110
DNA (723bp) protein (241aa)
hypothetical protein
hypothetical protein id=24658612 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25802.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_163_14
unknown

Not on your lists

17150..17896
DNA (747bp) protein (249aa)

This feature has no annotations

sw_6_scaffold_163_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18284..18643
DNA (360bp) protein (120aa)
Putative membrane protein {ECO:0000313|EMBL:ERH08557.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
GtrA-like family protein
hypothetical protein id=24647408 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
sw_6_scaffold_163_trna_1
unknown

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18704..18778
DNA (75bp)
transferRNA
sw_6_scaffold_163_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18852..19352)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23480.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_163_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19496..19981)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L824_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29238.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_163_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20261..20743)
DNA (483bp) protein (161aa)
dfp; pantothenate metabolism flavoprotein; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] id=24644319 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:ERH08553.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="hal
DNA/pantothenate metabolism flavoprotein
Displaying 19 items

View Taxonomy