ggKbase home page

sw_6_scaffold_615

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_615_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1..174)
DNA (174bp) protein (58aa)
tufA; translation elongation factor Tu (EF-Tu)
tufA; translation elongation factor Tu (EF-Tu); K02358 elongation factor Tu id=24659727 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_6_scaffold_615_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(257..2362)
DNA (2106bp) protein (702aa)
Elongation factor G n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Z7_SALRM
fusA; translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
sw_6_scaffold_615_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2445..2915)
DNA (471bp) protein (157aa)
30S ribosomal protein S7
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=24658954 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_6_scaffold_615_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3006..3416)
DNA (411bp) protein (137aa)
30S ribosomal protein S12 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Z6_SALRM
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_6_scaffold_615_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3856..6006)
DNA (2151bp) protein (717aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S0_SALRD
ftsH; cell division protein FtsH
sw_6_scaffold_615_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6090..6638
DNA (549bp) protein (183aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAH3_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH25028.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
sw_6_scaffold_615_7
unknown

Not on your lists

6657..7193
DNA (537bp) protein (179aa)

This feature has no annotations

sw_6_scaffold_615_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7104..7394)
DNA (291bp) protein (97aa)
Insertion element n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6P2_SALRM
Insertion element
Insertion element {ECO:0000313|EMBL:CBH23697.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_6_scaffold_615_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7745..7963
DNA (219bp) protein (73aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H877_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24232.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_6_scaffold_615_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

7960..8319
DNA (360bp) protein (120aa)
hypothetical protein id=14631671 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
sw_6_scaffold_615_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9009..9173
DNA (165bp) protein (55aa)
Thiol:disulfide interchange protein dsbE n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H501_SALRM
dsbE; thiol:disulfide interchange protein dsbE
Thiol:disulfide interchange protein dsbE {ECO:0000313|EMBL:CBH23106.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_6_scaffold_615_12
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9523..10038)
DNA (516bp) protein (172aa)
transposase IS4 family protein id=24657486 bin=Salinibacter_ruber species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=Salinibacter_ruber
Transposase {ECO:0000313|EMBL:AFM04754.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM
sw_6_scaffold_615_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10281..10805)
DNA (525bp) protein (175aa)
transposase IS4 family protein id=24657485 bin=Salinibacter_ruber species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=Salinibacter_ruber
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADE15906.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus h
sw_6_scaffold_615_14
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10918..11628)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B66087
hypothetical protein
Putative aminopeptidase Tax=RBG_16_Ignavibacteria_35_7_curated
Displaying 14 items

View Taxonomy