ggKbase home page

sw_6_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 39 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_71_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

89..1597
DNA (1509bp) protein (503aa)
Peptidase, M20/M25/M40 family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1R4_SALRD
hypothetical protein
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:ABC44628.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_6_scaffold_71_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1710..3215
DNA (1506bp) protein (502aa)
dacB; D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=24659710 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-alanyl-D-alanine carboxypeptidase [Precursor] {ECO:0000313|EMBL:CBH24882.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBH24882.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
dacB; D-alanyl-D-alanine carboxypeptidase
sw_6_scaffold_71_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3313..3858)
DNA (546bp) protein (182aa)
spmB; spore maturation protein B
spmB; spore maturation protein B; K06374 spore maturation protein B id=24659709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Spore maturation protein B {ECO:0000313|EMBL:CBH24881.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_6_scaffold_71_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3950..4969)
DNA (1020bp) protein (340aa)
spmA; spore maturation protein A
spmA; spore maturation protein A; K06373 spore maturation protein A id=24659708 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Spore maturation protein A {ECO:0000313|EMBL:CBH24879.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_6_scaffold_71_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5126..6436
DNA (1311bp) protein (437aa)
Patatin n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHW4_RHOM4
patatin
Patatin {ECO:0000313|EMBL:ACY48072.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC
sw_6_scaffold_71_6
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6616..7329)
DNA (714bp) protein (238aa)
Ribonuclease BN n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U285_9CYAN
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AFY88546.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
sw_6_scaffold_71_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7811..9361
DNA (1551bp) protein (517aa)
Magnesium chelatase subunit ChlI n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9K4_SALRM
chlI; magnesium chelatase subunit ChlI
Magnesium chelatase subunit ChlI {ECO:0000313|EMBL:CBH24709.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_6_scaffold_71_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9470..9877)
DNA (408bp) protein (136aa)
exbD; biopolymer transport exbD protein
exbD; biopolymer transport exbD protein; K03559 biopolymer transport protein ExbD id=24659543 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative biopolymer transport exbD protein {ECO:0000313|EMBL:CBH24708.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_6_scaffold_71_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10057..10797)
DNA (741bp) protein (247aa)
exbB; biopolymer transport protein ExbB
exbB; biopolymer transport protein ExbB; K03561 biopolymer transport protein ExbB id=24659542 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Biopolymer transport protein ExbB {ECO:0000313|EMBL:CBH24707.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_6_scaffold_71_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10828..11703)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9K1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24706.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11726..11929)
DNA (204bp) protein (68aa)
hypothetical protein
hypothetical protein id=24659540 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24705.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12069..13817)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9J9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24704.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13942..16959)
DNA (3018bp) protein (1006aa)
hypothetical protein
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44669.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
hypothetical protein id=24659538 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_71_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17192..17458
DNA (267bp) protein (89aa)
hypothetical protein
hypothetical protein id=24659537 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24702.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17655..18353
DNA (699bp) protein (233aa)
hypothetical protein
hypothetical protein id=24659536 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24701.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18707..19336
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9J5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24700.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19352..19684)
DNA (333bp) protein (111aa)
hypothetical protein
hypothetical protein id=24659534 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24699.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_71_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

19906..20253
DNA (348bp) protein (116aa)
alkylhydroperoxidase like protein, AhpD family Tax=RBG_16_Planctomycetes_55_9_curated
Alkylhydroperoxidase like protein, AhpD family id=2843274 bin=GWF2_Planctomycetes_42_9 species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
carboxymuconolactone decarboxylase
sw_6_scaffold_71_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20400..22301)
DNA (1902bp) protein (634aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C id=24659533 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=309807 species="Ba
uvrC; excinuclease ABC subunit C
sw_6_scaffold_71_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22611..22835
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65827.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sw_6_scaffold_71_21
unknown

Not on your lists

22917..23192
DNA (276bp) protein (92aa)

This feature has no annotations

sw_6_scaffold_71_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23268..24020)
DNA (753bp) protein (251aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=24659389 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit
sw_6_scaffold_71_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24602..26272
DNA (1671bp) protein (557aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=24659391 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CBH24554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_6_scaffold_71_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26556..28229
DNA (1674bp) protein (558aa)
ppx; Exopolyphosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] id=24659392 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Exopolyphosphatase {ECO:0000313|EMBL:CBH24555.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CBH24555.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
ppx; Exopolyphosphatase
sw_6_scaffold_71_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28583..29077
DNA (495bp) protein (165aa)
nuoJ; NADH dehydrogenase I subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] id=24659393 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase I, J subunit {ECO:0000313|EMBL:CBH24556.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH24556.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
nuoJ; NADH dehydrogenase I subunit J
sw_6_scaffold_71_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29199..29504
DNA (306bp) protein (102aa)
nuoK; NADH dehydrogenase I subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=24659394 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
nuoK; NADH dehydrogenase I subunit K
sw_6_scaffold_71_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29562..31562
DNA (2001bp) protein (667aa)
nuoL; NADH dehydrogenase I subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=24659395 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase I, L subunit {ECO:0000313|EMBL:ABC46047.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
nuoL; NADH dehydrogenase I subunit L
sw_6_scaffold_71_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31795..33429
DNA (1635bp) protein (545aa)
nuoM; NADH dehydrogenase i, m subunit; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=24659396 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase i, m subunit {ECO:0000313|EMBL:ABC45456.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABC45456.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
nuoM; NADH dehydrogenase i, m subunit
sw_6_scaffold_71_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33477..33773
DNA (297bp) protein (99aa)
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=24659397 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
pterin-4-alpha-carbinolamine dehydratase
sw_6_scaffold_71_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34093..35592
DNA (1500bp) protein (500aa)
nuoN; proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] id=24659398 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
nuoN; proton-translocating NADH-quinone oxidoreductase subunit N
Displaying items 1-30 of 39 in total

View Taxonomy