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sw_6_scaffold_63_11

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: 10720..10959

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:EZP79151.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 63.0
  • Bit_score: 66
  • Evalue 2.70e-08
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 71.0
  • Bit_score: 64
  • Evalue 2.10e-08
RNA polymerase, sigma-24 subunit, ECF subfamily id=1891284 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 68.0
  • Bit_score: 64
  • Evalue 5.70e-08

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Taxonomy

Geobacillus stearothermophilus → Geobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
GTGGTCGAAACGGCCGAGGGCCGGCAGCGGCGCGACATCGTGCGCGAGGGGATCGGGGCCCTGTCGGAGCACTACCGAACCGCTCTCACGCTGTATCATTTGGAGGGGATGAGCGTATCACAGATTAGCGAGGTCATGGACAACCCCGAGGGCACGGTGAAGAGCCATCTGTACCGGGGGCGCAAAAAGCTGAAGGACTGGGTACTGGACCGCTACCAACGCGAGGAGATCACGGTATGA
PROTEIN sequence
Length: 80
VVETAEGRQRRDIVREGIGALSEHYRTALTLYHLEGMSVSQISEVMDNPEGTVKSHLYRGRKKLKDWVLDRYQREEITV*