ggKbase home page

sw_6_scaffold_3263_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 220..1140

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6C6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 299.0
  • Bit_score: 277
  • Evalue 1.30e-71
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectot similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 299.0
  • Bit_score: 277
  • Evalue 1.80e-71
RNA polymerase subunit sigma-70 similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 271.0
  • Bit_score: 271
  • Evalue 2.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ectothiorhodospira sp. PHS-1 → Ectothiorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGCCGAGAGCATGAATCAGGAACAACAGTCGCGCCTGAAGGAGCTCATTGCCAAGGGCAAAGAGCAAGGCTACCTGACCTACGCCGAGGTCAACGACCACCTGCCCGACGGTGTCGTCGAGCCCGACCAAGTCGAGGACATCATCTCCATGATCAACGACATGGGGATCCAGGTCCACGAGGTCGCGCCCGACAACGACACCATGATGCTCGCCGACGAGGCGGTGAGCACCGCCGACGACGACGCCGCCGACGAGGCCGCGCAGGCCCTGGCGACGGTCGACGGCGAGTTCGGCCGCACCACCGACCCCGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAGCTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGACGGCACCCGCCAGATGATGGCTGCGCTGGCCGACTACCCCGGCACCGCCGGCGCCATCCTGAGCAAGTGGCACGAGATCGAGAACGGCGAGGCGCGCCTGACCGATCTGATGAGCGGGTTCCAGGACCCCGAGGCGCCCGACAACGCCGTCTCGCCCTCGGCCGATGACTCCGCCGATCGCAGCGCCGACGACGAGGGCGAGGAAGAAGGCTCGGCCGACACCTCGATCGACATCGAGGCGGTGCGCAGCCACATGGCCAAGCTCGAGGCCCAGCACAACCGCGTGATGCAGTCGCTGGCGAAGGCCGCGCGCCAGCGCACCCAGCCCAAGTCGGGCATGCGGGCGCAGAAGCAGCGCCAGGAGCTCGCGCGCCAGGTCAGATCGCCACGCGCGAGGCCGGGATATCGCGCAAGGGCTTCATCGCCTCATTCAGCGGGCGCGAGTCCGATCCGAAATGGCTCCAGGAGCTCATCGACGCCAACAAGGACTACTCGTCCAAGCTCGCCGAGCGCGGTGACGCGGTGA
PROTEIN sequence
Length: 307
VAESMNQEQQSRLKELIAKGKEQGYLTYAEVNDHLPDGVVEPDQVEDIISMINDMGIQVHEVAPDNDTMMLADEAVSTADDDAADEAAQALATVDGEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEDGTRQMMAALADYPGTAGAILSKWHEIENGEARLTDLMSGFQDPEAPDNAVSPSADDSADRSADDEGEEEGSADTSIDIEAVRSHMAKLEAQHNRVMQSLAKAARQRTQPKSGMRAQKQRQELARQVRSPRARPGYRARASSPHSAGASPIRNGSRSSSTPTRTTRPSSPSAVTR*