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sw_6_scaffold_3263_2

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 1137..1970

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036DC1C6 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 484
  • Evalue 6.20e-134
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 cla similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 277.0
  • Bit_score: 483
  • Evalue 2.50e-133
RNA polymerase subunit sigma-70 similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 276.0
  • Bit_score: 480
  • Evalue 2.50e-133

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Taxonomy

marine gamma proteobacterium HTCC2080 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGAAGGAGGCGCAGGACAAGCTCGCCGAGGTCGAGCAACGCACCCATCTGCCGGTCGCCGAGATCAAGGAGACCAACCGGCGCCTGTCGATCGGCGAGGCCAAGGCCCGGCGCGCCAAGAAGGAGATGGTCGAGGCCAACCTGCGCTTGGTGATCTCGATCGCCAAGAAGTACACCAATCGCGGGCTACAGTTCCTCGATCTCATCCAGGAGGGCAATATCGGCCTGATGAAGGCCGTCGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACTTATGCGACCTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCGGATCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGCTCAACCGGATCTCGCGCCAGATGCTGCAGGAGATGGGCCGCGAGCCCACCCCGGAAGAGCTCGCCGAGCGCATGGAAATGCCCGAGGAGAAGGTCCGCAAGGTGATGAAGATCGCCAAAGAGCCCATCTCCATGGAGACCCCGATCGGCGACGATGAGGACTCGCACCTGGGCGACTTCATCGAGGACCAGTCGGTGCAATCGCCGGTCGACGCGGCCACCACCGAGGGCCTGTCCGAGACCACCGAGGGCGTGCTCGCCAGCCTCACCCCGCGCGAGGCCAAGGTCCTGCGCATGCGCTTTGGCATCGGCATGAACACTGACCACACCCTCGAAGAGGTCGGCAAGCAGTTCGACGTCACGCGCGAGCGGATCCGCCAGATCGAGGCGAAGGCCTTGCGCAAGCTGCGCCACCCGAGCCGCTCGGAGCAGCTACGCAGCTTCCTCGACGAGTAG
PROTEIN sequence
Length: 278
VKEAQDKLAEVEQRTHLPVAEIKETNRRLSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMEMPEEKVRKVMKIAKEPISMETPIGDDEDSHLGDFIEDQSVQSPVDAATTEGLSETTEGVLASLTPREAKVLRMRFGIGMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDE*