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sw_7_scaffold_1193

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1193_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..694
DNA (693bp) protein (231aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ACV47894.1}; EC=3.6.4.6 {ECO:0000313|EMBL:ACV47894.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
AAA family ATPase, CDC48 subfamily n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P472_HALMD
sw_7_scaffold_1193_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(698..1354)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1P3L2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11300.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_7_scaffold_1193_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1950..2630)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS06_NATPD
abc14r_2; ABC transporter
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_7_scaffold_1193_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2842..3066
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RT23_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60903.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_7_scaffold_1193_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3403..4398
DNA (996bp) protein (332aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS11_NATPD
abc14r_1; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI49079.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_7_scaffold_1193_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4439..5113
DNA (675bp) protein (225aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 9 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=2 Tax=Natronomonas pharaonis RepID=Q3IS12_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI49078.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_7_scaffold_1193_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5120..5440)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS13_NATPD
CTP/GMP synthase operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49077.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_7_scaffold_1193_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5433..6350)
DNA (918bp) protein (306aa)
GMP synthase [glutamine-hydrolyzing] subunit B {ECO:0000256|HAMAP-Rule:MF_00345}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00345};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00345}; TaxID=485914 species=
GMP synthase [glutamine-hydrolyzing] subunit B n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P343_HALMD
GMP synthase subunit B
sw_7_scaffold_1193_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6358..7842)
DNA (1485bp) protein (495aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000255|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000255|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000255|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000255|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRG_NATPD
sw_7_scaffold_1193_10
unknown

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comp(7921..8568)
DNA (648bp) protein (216aa)

This feature has no annotations

sw_7_scaffold_1193_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8658..9242)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQE4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36378.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_7_scaffold_1193_12
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9606..9929)
DNA (324bp) protein (108aa)
IS240-type transposase ISH29 n=2 Tax=Halobacterium salinarum RepID=B0R9H9_HALS3
IS240-type transposase (ISH102)
ISH14-type transposase ISH29 {ECO:0000313|EMBL:CAP15265.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salina
sw_7_scaffold_1193_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10287..10664)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0T6_HALMD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACV47068.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
sw_7_scaffold_1193_14
unknown

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comp(11200..11358)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_7_scaffold_1193_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11358..12224)
DNA (867bp) protein (289aa)
3-oxoacyl-ACP reductase n=1 Tax=Halomicrobium katesii RepID=UPI000380F739
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACV47069.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicro
sw_7_scaffold_1193_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12268..12771)
DNA (504bp) protein (168aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] id=24613545 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ESP90179.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
sw_7_scaffold_1193_17
unknown

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comp(12776..12964)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_7_scaffold_1193_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13064..13633)
DNA (570bp) protein (190aa)
N-acylamino acid racemase n=1 Tax=Halomicrobium katesii RepID=UPI00036B130E
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ACV47070.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
sw_7_scaffold_1193_19
unknown

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13641..14057
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 19 items

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