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sw_7_scaffold_1112

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1112_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..163
DNA (162bp) protein (54aa)
Selenium-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Z3_HALJB
selenium-binding protein
Selenium-binding protein {ECO:0000313|EMBL:ADJ13799.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
sw_7_scaffold_1112_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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165..494
DNA (330bp) protein (110aa)
Ferredoxin n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIM0_HALJP
Ferredoxin {ECO:0000313|EMBL:EMA33457.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
fdx; ferredoxin
sw_7_scaffold_1112_3
unknown

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1567..2118
DNA (552bp) protein (184aa)

This feature has no annotations

sw_7_scaffold_1112_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3208..3504)
DNA (297bp) protein (99aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK6_HALLT
CRISPR-associated protein Cas2
sw_7_scaffold_1112_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3470..4465)
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK7_HALLT
CRISPR-associated protein Cas1
sw_7_scaffold_1112_6
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4475..5044)
DNA (570bp) protein (190aa)
CRISPR-associated protein Cas4 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK8_HALLT
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ACM58849.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_7_scaffold_1112_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5212..7770)
DNA (2559bp) protein (853aa)
Putative helicase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JGA5_9EURY
Putative helicase {ECO:0000313|EMBL:EMA08152.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.
cas3; CRISPR-associated helicase Cas3
sw_7_scaffold_1112_8
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7818..8663)
DNA (846bp) protein (282aa)
CRISPR-associated protein Cas5, Hmari subtype n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KZD9_HALAR
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:EMA25145.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
CRISPR-associated protein Cas5
sw_7_scaffold_1112_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8669..9733)
DNA (1065bp) protein (355aa)
CRISPR-associated protein, Csh2 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL1_HALLT
CRISPR-associated protein, Csh2 family
CRISPR-associated protein, Csh2 family {ECO:0000313|EMBL:ACM58852.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
sw_7_scaffold_1112_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9736..11931)
DNA (2196bp) protein (732aa)
CRISPR-associated protein Csh1 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJ57_9EURY
CRISPR-associated protein Csh1 {ECO:0000313|EMBL:AHG05445.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
CRISPR-associated protein, Csh1 family
sw_7_scaffold_1112_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11928..12770)
DNA (843bp) protein (281aa)
CRISPR-associated protein Cas6 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L9B9_9EURY
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:EMA30171.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
cas6; CRISPR-associated protein Cas6
sw_7_scaffold_1112_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13087..13389)
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N531_9EURY
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EMA52234.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
Antibiotic biosynthesis monooxygenase
sw_7_scaffold_1112_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13676..14239
DNA (564bp) protein (188aa)
DNA mismatch repair protein MutL n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU24_NATPD
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
Displaying 13 items

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