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sw_7_scaffold_2143

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2143_1
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(96..476)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P5M6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65371.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_7_scaffold_2143_2
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(568..798)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P965_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65370.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_7_scaffold_2143_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(895..1776)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YU30_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY77191.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_7_scaffold_2143_4
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1871..2476)
DNA (606bp) protein (202aa)
Transcription initiation factor IIB n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GYV6_HALL2
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_7_scaffold_2143_5
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2917..3813)
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=M0F878_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ66001.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
TIGR02391 family protein
sw_7_scaffold_2143_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3883..4764)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XA29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58301.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
sw_7_scaffold_2143_7
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4884..5249
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CZ09_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO58086.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_7_scaffold_2143_8
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5268..6350)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WD64_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY35031.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
sw_7_scaffold_2143_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6625..7491)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Haloquadratum walsbyi RepID=Q18EF5_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ53673.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_7_scaffold_2143_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8043..9221
DNA (1179bp) protein (393aa)
SEC-C motif domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY23_9EURY
SEC-C motif domain-containing protein {ECO:0000313|EMBL:EMA50218.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
hypothetical protein
sw_7_scaffold_2143_11

Not on your lists

comp(9475..9798)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQF7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07543.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_2143_12

Not on your lists

comp(9795..10136)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQF6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07542.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_2143_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10133..10492)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQ86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62216.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_7_scaffold_2143_14
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10584..10910)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P954_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65360.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_7_scaffold_2143_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10910..11200)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JS46_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB34074.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_7_scaffold_2143_16
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11453..11704
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YSI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY77180.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_7_scaffold_2143_17

Not on your lists

11704..12030
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVJ3_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07351.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_2143_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12122..12322
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQ86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62216.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
Displaying 18 items

View Taxonomy
NameRatio
Halobacteria
77.78%
unknown
16.67%
Chloroflexia
5.56%
Halobacteria: 0.7777777777777778unknown: 0.16666666666666666Chloroflexia: 0.05555555555555555Halobacteriaunknown