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sw_7_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_29_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..175
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50638.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_7_scaffold_29_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(172..879)
DNA (708bp) protein (236aa)
ParA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM1_NATPD
hypothetical protein
ParA domain protein {ECO:0000313|EMBL:CAI50637.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_7_scaffold_29_3
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

982..1596
DNA (615bp) protein (205aa)
Type 11 methyltransferase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H8H9_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ80103.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;
hypothetical protein
sw_7_scaffold_29_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1598..2017)
DNA (420bp) protein (140aa)
HIT family hydrolase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TY94_9EURY
HIT family hydrolase {ECO:0000313|EMBL:AHG04934.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hit1; histidine triad family protein
sw_7_scaffold_29_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2140..2490
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT69_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10880.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_29_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2544..3161
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3R4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37166.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_7_scaffold_29_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3227..5158
DNA (1932bp) protein (644aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1H8_HALTV
Kinetochore-Ndc80 complex, subunit Spc25
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:ADB63225.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_7_scaffold_29_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5865..6557)
DNA (693bp) protein (231aa)
hadL; 2-haloalkanoic acid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KPA5_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA21984.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33
sw_7_scaffold_29_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6931..7782
DNA (852bp) protein (284aa)
MOSC domain-containing protein beta barrel domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG58_9EURY
MOSC domain-containing protein beta barrel domain-containing protein {ECO:0000313|EMBL:EMA44712.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
putative Fe-S protein
sw_7_scaffold_29_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7903..8970)
DNA (1068bp) protein (356aa)
TRAP transporter solute receptor, TAXI family protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XDI3_9EURY
TRAP transporter solute receptor, TAXI family protein {ECO:0000313|EMBL:ELY58683.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" sourc
TRAP-type transport system periplasmic protein 2
sw_7_scaffold_29_11

Not on your lists

comp(9057..10178)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTW7_9EURY
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
malate/lactate dehydrogenase
sw_7_scaffold_29_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10666..12681
DNA (2016bp) protein (672aa)
TRAP-type transport system permease protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBF3_HALJB
TRAP-type transport system permease protein
TRAP-type transport system permease protein {ECO:0000313|EMBL:ADJ16606.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Hal
sw_7_scaffold_29_13
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12742..14193)
DNA (1452bp) protein (484aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HWS6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:ELZ88183.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
sw_7_scaffold_29_14
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14190..15197)
DNA (1008bp) protein (336aa)
Transketolase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W723_9EURY
Transketolase {ECO:0000313|EMBL:ELY45274.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;
transketolase
sw_7_scaffold_29_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15200..16339)
DNA (1140bp) protein (380aa)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Halogranum salarium B-1 RepID=J3JCZ0_9EURY
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EJN57031.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salari
2-oxo acid dehydrogenase
sw_7_scaffold_29_16
unknown

Not on your lists

comp(16401..16598)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_7_scaffold_29_17
unknown

Not on your lists

comp(16732..16830)
DNA (99bp) protein (33aa)

This feature has no annotations

sw_7_scaffold_29_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16846..17046
DNA (201bp) protein (67aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPC2_NATM8
IS240-type transposase
ISH14-type transposase ISNamo7 {ECO:0000313|EMBL:CCQ35868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_7_scaffold_29_19
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17109..17552)
DNA (444bp) protein (148aa)
MaoC domain protein dehydratase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XSL6_9EURY
MaoC domain protein dehydratase {ECO:0000313|EMBL:ELY64502.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1
acyl dehydratase
sw_7_scaffold_29_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17642..18670)
DNA (1029bp) protein (343aa)
ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5W2_9EURY
ABC transporter permease {ECO:0000313|EMBL:ELZ43180.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.
ABC transporter permease
sw_7_scaffold_29_21
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18728..19642)
DNA (915bp) protein (305aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24641132 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH13980.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
ABC transporter permease
sw_7_scaffold_29_22
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19635..21686)
DNA (2052bp) protein (684aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E833_9EURY
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ELZ43178.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense D
sw_7_scaffold_29_23
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21691..22512)
DNA (822bp) protein (274aa)
sulfate-transporting ATPase (EC:3.6.3.25)
High-affinity branched-chain amino acid transport ATP-binding protein livG n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E8C2_9EURY
High-affinity branched-chain amino acid transport ATP-binding protein livG {ECO:0000313|EMBL:ELZ43177.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
sw_7_scaffold_29_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22515..23354)
DNA (840bp) protein (280aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5X9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ43176.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
sw_7_scaffold_29_25
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23356..24654)
DNA (1299bp) protein (433aa)
Extracellular ligand-binding receptor n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5V8_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ELZ43175.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
ABC transporter substrate-binding protein
sw_7_scaffold_29_26
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24730..25941)
DNA (1212bp) protein (404aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Coenzyme A ligase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5Y4_9EURY
Coenzyme A ligase {ECO:0000313|EMBL:ELZ43181.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
sw_7_scaffold_29_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26216..26683)
DNA (468bp) protein (156aa)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4051056 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
sw_7_scaffold_29_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26683..27876)
DNA (1194bp) protein (398aa)
propanoyl-CoA C-acyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWA2_Rokubacteria_70_23_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=4051058 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sw_7_scaffold_29_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27873..29006)
DNA (1134bp) protein (378aa)
propanoyl-CoA C-acyltransferase Tax=GWA2_Rokubacteria_70_23_curated
Propanoyl-CoA C-acyltransferase id=4051060 bin=GWF2_Methylomirabilis_70_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acaB-4; 3-ketoacyl-CoA thiolase
sw_7_scaffold_29_30
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

29180..29944
DNA (765bp) protein (255aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CKL5_SYNLT
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 41 in total

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