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sw_7_scaffold_439

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_439_trna_1
unknown

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227..301
DNA (75bp)
transferRNA
sw_7_scaffold_439_1
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(813..3581)
DNA (2769bp) protein (923aa)
PQQ repeat protein / protein kinase domain protein id=24617602 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
WD40 repeat protein {ECO:0000313|EMBL:ERH05205.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
PQQ repeat protein / protein kinase domain protein rbh
sw_7_scaffold_439_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3979..5916)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRA1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36701.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_7_scaffold_439_3
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5913..6449)
DNA (537bp) protein (179aa)
hypothetical protein id=24621665 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH02099.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_7_scaffold_439_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6715..6993
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR58_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36702.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_7_scaffold_439_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7054..7722
DNA (669bp) protein (223aa)
PspA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKX8_NATM8
pspA2; PspA domain protein
PspA domain protein {ECO:0000313|EMBL:CCQ36703.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_7_scaffold_439_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7726..8937
DNA (1212bp) protein (404aa)
AAA-type ATPase core domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR74_NATM8
AAA-type ATPase core domain protein
AAA-type ATPase core domain protein {ECO:0000313|EMBL:CCQ36704.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
sw_7_scaffold_439_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9055..9768
DNA (714bp) protein (238aa)
prpC; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase {ECO:0000313|EMBL:CCQ36706.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CCQ36706.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
Phosphoprotein phosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRA4_NATM8
sw_7_scaffold_439_8
unknown

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9892..10668
DNA (777bp) protein (259aa)

This feature has no annotations

sw_7_scaffold_439_9
Tetraodon nigroviridis, Tetraodon, Tetraodontiformes, Neopterygii, Chordata, Metazoa

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10747..12507
DNA (1761bp) protein (587aa)
Chromosome 7 SCAF15042, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RIP0_TETNG
Chromosome 7 SCAF15042, whole genome shotgun sequence {ECO:0000313|EMBL:CAG11742.1}; Flags: Fragment;; TaxID=99883 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopter
hypothetical protein
sw_7_scaffold_439_10
unknown

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12520..13281
DNA (762bp) protein (254aa)

This feature has no annotations

sw_7_scaffold_439_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13381..14172
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NJU9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG97233.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_7_scaffold_439_12

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14614..16824
DNA (2211bp) protein (737aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003819B25
Protein kinase domain protein {ECO:0000313|EMBL:ESS11256.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
serine/threonine protein kinase
sw_7_scaffold_439_13
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17030..17500
DNA (471bp) protein (157aa)
ABC-type phosphate transport system, ATP-binding protein n=1 Tax=uncultured haloarchaeon RepID=A5YT61_9EURY
ABC-type phosphate transport system, ATP-binding protein {ECO:0000313|EMBL:ABQ76168.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental sam
ISH11-type transposase ISHwa14
sw_7_scaffold_439_14
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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17523..17993
DNA (471bp) protein (157aa)
ISH11-type transposase ISHwa14 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQH4_NATP1
transposase family protein
ISH11-type transposase ISHwa14 {ECO:0000313|EMBL:ELY68394.1}; Transposase family protein {ECO:0000313|EMBL:AGB33770.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
sw_7_scaffold_439_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18760..19854)
DNA (1095bp) protein (365aa)
(R)-citramalate synthase (EC:2.3.1.182)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIJ5_9EURY
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:ERH10266.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_7_scaffold_439_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19885..21081)
DNA (1197bp) protein (399aa)
CAIB/BAIF family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH4_HALMO
CAIB/BAIF family protein {ECO:0000313|EMBL:EMA46629.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 130
baiF1; CAIB/BAIF family protein
sw_7_scaffold_439_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21078..22178)
DNA (1101bp) protein (367aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MMN9_HALMO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA46628.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
tsgD6; sugar ABC transporter ATP-binding protein
sw_7_scaffold_439_18
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(22183..23055)
DNA (873bp) protein (291aa)
Sugar ABC transporter permease n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GWR0_9EURY
tsgC6; sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:ELZ75947.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
sw_7_scaffold_439_19

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comp(23055..23966)
DNA (912bp) protein (304aa)
ABC transporter n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EBB0_9EURY
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ESS02358.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC transporter
sw_7_scaffold_439_20

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comp(23968..25350)
DNA (1383bp) protein (461aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY2_9ARCH
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ESS02357.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
family 1 extracellular solute-binding protein
sw_7_scaffold_439_21
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(25436..26101)
DNA (666bp) protein (222aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L366_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA28002.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
boa7; bacterio-opsin activator-like protein
sw_7_scaffold_439_22
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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26325..27116
DNA (792bp) protein (264aa)
Type 11 methyltransferase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A1K8_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY92211.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
type 11 methyltransferase
sw_7_scaffold_439_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(27643..27981)
DNA (339bp) protein (113aa)
ABC transporter related protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteriu
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
Displaying 24 items

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