ggKbase home page

sw_7_scaffold_504_15

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 13448..16267

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated nuclease/helicase Cas3 {ECO:0000303|PubMed:22767603}; EC=3.1.-.-;; EC=3.6.4.-;; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.; similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 992.0
  • Bit_score: 613
  • Evalue 4.20e-172
CRISPR-associated helicase Cas3 n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN8_HALVD similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 992.0
  • Bit_score: 613
  • Evalue 3.00e-172
cas3; CRISPR-associated helicase Cas3 similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 992.0
  • Bit_score: 613
  • Evalue 8.40e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloferax volcanii → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2820
ATGACGATCGACACCATCATTTCACACCCACGGGACGACGGGCCGGACTTCGAACTCGAATGCCACCTTCGAGATGTGAAGTCCCGAATGTACGATTTCGGCAGTTTCAACGATTCAGGGGCGTGTAGCGAGCGACGCGTTGCGGGCGTGATCGGATCACTTCACGACTTCGGAAAGGTGACGCCAGCGTTTCAACAACATGTACGTGACCAGTACCACGGGCCGCCCCAACCGACGTACCACGCCCGCCTCGGAGCGCTCGTAGCCTTCTGGGTCGTTCGTGAAACGGGTGGTGACGACCGTGACGCGCTTGCTGCTTTTGCGGCAATCTCACGACACCACGGCTCACTGCCAGACATCGTTCGACACGTACGTAGCGACGTGTACGAGACTGAAACCGGCAGTAATGACGCGGAGGGATGGGCCAGCGCACAGGTCGATTCCATCGGCGAGAACGAGATGCACGCCGCGAAAGCGAACCAGTTTCTCGTGTCTGCGGGTGACGAGACGACGACCTGGCAGCGGTTCGCCAAGGCAATCGACAACGGGTCATTGTACACCTCTCTCGCGGATCTGGTTACTGAGGATATGGGATTCGACATGCGTGAACCGAGGCCGGAGAATCTTCCGCCGCGCCTCTACGACCGGACACTCAAGTACTGGGGACATCTGACTCTCGCAGACAAGACCAGTGCAGGAGATATTGACCGCTCGAAGTTGCGGCGAGATCCGCTCTCGAAAGGAGATCTGGATTCGCATGTCGATACGTTGGAAGCAGACGACGAACTGGAGCAGCGACTCAACGAATTCCGTGACCGTGCCAGGGAGAACGCACCGGAGAACGCGGTAGAAAAACTCCTCGATGGCGAAGGTGACATCGGTCGTCTCACACTTCCAACGGGCCTCGGGAAGACATTCACCGGGATCACGACCGCGTATACGCTTCGCGACGAAATCGCTGAACGGCGAGAACTCGCCGAAAAACCGACCGTCGTCTACGCGCTCCCGTTCACGTCCATCATCGAACAGACGAGAGAGATATTCGAGGACCCGGACATCTGGCACGCCGACCCGACCGGCCACGCGCTGACCGTCCATCACTACCTCAGCGAGACGGTAACGCGAGTCGATTCGGAGGTCGAAACCGACGGTGAGGCCGAGACGGACGAGGGGACGTACGTCGAGTCGATGCTCGGAGAAAGCTGGCGTGCCGGGACGGTCCTGACAACGTTCGTCCAGCTGTTTGAGAGTCTGGCCGGCCCGACGAACAGTGAAGGGCTCAAATATTCGGCGCTGCAGGACGCCATCATTATCCTCGACGAACCACAGGCACTACCGAAACGCTGGTGGGCGGCCATCCCCCGTCTCGTCGAGATATTGCGAACGGAATTCGACGCCACGGTACTCGCGATGACCGCCACCCAGCCGGCGCTGTTCGAGCACAACGAGGCGCTGACGGCGGTCGGGATTCTCGACGACGTGGACCAGTATTATAGGGAGGCCCAGCGAGTACGGTACGATATCGACGATTCGGTGTGGGCAGTCGGAAATCCCGAGTCGGACGTTCGGCCTCTGGACCACGAAACGGCCGGCGAGCGAATTGCAGATGCTGTTCTCGAATCCGACAAACGAGAACGGTCGCGCTCCTCGGCGCTCGCGGTATGCAACACGATCGCGAGTTCTCGGGGATTGACCGAGACTGTCGAGGAAGGGTCACCAGTCCCCGTCGAACACGTCGGCGAGACCTATCGAAACGTGCTCGAAGATCTGGAAGAGGAGGAACCTGCCGAGTGGGATCAAGACGCCGAACAGTTCAACGGGGGGACGAACGTAGACATACTCGCCAAGGCGGTTCTCGAAGAACTCGGGTTTACTGCCTCGGGGGAGTGGCCTGGACCGGAATCGGAATCGATCACTGCCGTATCGTGGTCTTGGACTGGAGACGGAGCTCCACCCCTGTTCCTCTCGACGTTTAATTCGCGCTATCGACCGAAGGATCGGCGCGTTCTCATTCGACTCGCGGATGTACTGACTGGCGTTCGGATCCCGTTCGCGATGGTCTCGACGCAGGCGGTCGAGGCCGGCGTCGATCTCAGTTTCGCACGCGTCTATCGCGATATGGCACCGCTAGATAGTATCGTACAAGCCGCTGGTCGCTGTAACCGCTCCTTCGAATGGGGGAGAGAGAACGGGCACGTCACCTTGTGGTTGCTCGACGACCCTAACGAACCGTCGGCAAAACTCGACGAGACGCCGGTCAAGTACGTGTACGGGAACGATATTGGCGAACATCTGACGATCATTGCCGAGTCGTTGCGGGAAGAACTCTCGAAGAGAACTGACGTCGACGAACTCAGGATGACCAGAGAAGCCGTGCCGACGTACTTCTCCAAGATTCGGGGAAAGTCGTTCACGAGCCAGGAACTGGTCGACTTCATCGAACAGTTCGACGCAGAATCGCTCGGACGGAAGTCACTCATCCAGGAAGACTATCCAACGGTCGATGTCCTCGTCGCAGTCACCGATTGGGAGCGTTCACTCCTTGAGCAGATCCGCACCTCATTCAGCCAGGGGAATAAACCGCGCGCATTTACGCAACTACAGCGAGCGTCGGATCTCCGCGTTTCCGTCCCGGCGCGAGACGCAGAGAATGCACTCTCAAAGGCGCCCCGCGTCGATCACGAAGAACGTGGCGAGCATGAAGGCGCACAGGTTCTAGCTTACGAACCGAACACACCGGGCGGATCGTACGACCTCGACGCTGGGGGATTCGTCGCAGATGATGACGACGTGATCGGGGGGAGGTTCACTGTCATATGA
PROTEIN sequence
Length: 940
MTIDTIISHPRDDGPDFELECHLRDVKSRMYDFGSFNDSGACSERRVAGVIGSLHDFGKVTPAFQQHVRDQYHGPPQPTYHARLGALVAFWVVRETGGDDRDALAAFAAISRHHGSLPDIVRHVRSDVYETETGSNDAEGWASAQVDSIGENEMHAAKANQFLVSAGDETTTWQRFAKAIDNGSLYTSLADLVTEDMGFDMREPRPENLPPRLYDRTLKYWGHLTLADKTSAGDIDRSKLRRDPLSKGDLDSHVDTLEADDELEQRLNEFRDRARENAPENAVEKLLDGEGDIGRLTLPTGLGKTFTGITTAYTLRDEIAERRELAEKPTVVYALPFTSIIEQTREIFEDPDIWHADPTGHALTVHHYLSETVTRVDSEVETDGEAETDEGTYVESMLGESWRAGTVLTTFVQLFESLAGPTNSEGLKYSALQDAIIILDEPQALPKRWWAAIPRLVEILRTEFDATVLAMTATQPALFEHNEALTAVGILDDVDQYYREAQRVRYDIDDSVWAVGNPESDVRPLDHETAGERIADAVLESDKRERSRSSALAVCNTIASSRGLTETVEEGSPVPVEHVGETYRNVLEDLEEEEPAEWDQDAEQFNGGTNVDILAKAVLEELGFTASGEWPGPESESITAVSWSWTGDGAPPLFLSTFNSRYRPKDRRVLIRLADVLTGVRIPFAMVSTQAVEAGVDLSFARVYRDMAPLDSIVQAAGRCNRSFEWGRENGHVTLWLLDDPNEPSAKLDETPVKYVYGNDIGEHLTIIAESLREELSKRTDVDELRMTREAVPTYFSKIRGKSFTSQELVDFIEQFDAESLGRKSLIQEDYPTVDVLVAVTDWERSLLEQIRTSFSQGNKPRAFTQLQRASDLRVSVPARDAENALSKAPRVDHEERGEHEGAQVLAYEPNTPGGSYDLDAGGFVADDDDVIGGRFTVI*