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sw_7_scaffold_504

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_504_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..445
DNA (444bp) protein (148aa)
putative transcriptional regulator, AsnC family protein id=24613658 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ESP89718.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobo
putative transcriptional regulator, AsnC family protein
sw_7_scaffold_504_2
unknown

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comp(534..662)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_7_scaffold_504_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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760..1341
DNA (582bp) protein (194aa)
ArsR family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1N3_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ28778.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
ArsR family transcriptional regulator
sw_7_scaffold_504_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1466..1813)
DNA (348bp) protein (116aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D253_9EURY
MJ0936 family phosphodiesterase
sw_7_scaffold_504_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2031..3134
DNA (1104bp) protein (368aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ACV48008.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ACV48008.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
glycine dehydrogenase subunit 1 n=1 Tax=Halomicrobium katesii RepID=UPI0003623C75
sw_7_scaffold_504_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3906..4811
DNA (906bp) protein (302aa)
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:ELZ25618.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ELZ25618.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase subunit 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSK3_9EURY
sw_7_scaffold_504_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5254..5790
DNA (537bp) protein (179aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSV1_9EURY
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:ELZ26345.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
ATP:cob(I)alamin adenosyltransferase
sw_7_scaffold_504_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5951..6973)
DNA (1023bp) protein (341aa)
Beta-lactamase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWS7_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ26344.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
beta-lactamase
sw_7_scaffold_504_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7167..7424
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J139_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01435.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_504_trna_1
unknown

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7477..7551
DNA (75bp)
transferRNA
sw_7_scaffold_504_10
unknown

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8083..8247
DNA (165bp) protein (55aa)

This feature has no annotations

sw_7_scaffold_504_11
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8560..9306
DNA (747bp) protein (249aa)
CRISPR-associated protein Cas6 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LLY0_9EURY
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:EMA34108.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduce
CRISPR-associated endoribonuclease Cas6
sw_7_scaffold_504_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9306..11468
DNA (2163bp) protein (721aa)
CRISPR-associated protein, Csh1 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL2_HALLT
CRISPR-associated protein, Csh1 family
CRISPR-associated protein, Csh1 family {ECO:0000313|EMBL:ACM58853.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
sw_7_scaffold_504_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11458..12573
DNA (1116bp) protein (372aa)
CRISPR-associated protein, Csh2 family n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JKD2_9EURY
CRISPR-associated protein, Csh2 family {ECO:0000313|EMBL:EMA08150.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula si
CRISPR-associated protein, Csh2 family
sw_7_scaffold_504_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12578..13432
DNA (855bp) protein (285aa)
CRISPR-associated protein Cas5, Hmari subtype n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LAL9_9EURY
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:EMA30168.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma
CRISPR-associated protein Cas5, Hmari subtype
sw_7_scaffold_504_15
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13448..16267
DNA (2820bp) protein (940aa)
CRISPR-associated nuclease/helicase Cas3 {ECO:0000303|PubMed:22767603}; EC=3.1.-.-;; EC=3.6.4.-;; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
CRISPR-associated helicase Cas3 n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN8_HALVD
cas3; CRISPR-associated helicase Cas3
sw_7_scaffold_504_16
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16264..16833
DNA (570bp) protein (190aa)
CRISPR-associated protein Cas4 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK8_HALLT
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ACM58849.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_7_scaffold_504_17
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16837..17832
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK7_HALLT
CRISPR-associated protein Cas1
sw_7_scaffold_504_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17835..18095
DNA (261bp) protein (87aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK6_HALLT
CRISPR-associated protein Cas2
Displaying 19 items

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