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sw_7_scaffold_1182

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1182_trna_1
unknown

Not on your lists

121..194
DNA (74bp)
transferRNA
sw_7_scaffold_1182_1
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

299..1006
DNA (708bp) protein (236aa)
Putative TetR-family transcriptional regulator n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K1Q7_STREN
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF68566.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 5
TetR-family transcriptional regulator
sw_7_scaffold_1182_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1003..2853
DNA (1851bp) protein (617aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) RepID=H2K4M7_STRHJ
ABC transporter ATP-binding protein Tax=RBG_16_Actinobacteria_68_21_curated
daunorubicin resistance ABC transporter ATPase
sw_7_scaffold_1182_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2886..3875
DNA (990bp) protein (330aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1129896 species="Bacteri
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000369E886
UPF0135 protein
sw_7_scaffold_1182_4
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3909..4643
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HJD7_STRA9
Uncharacterized protein {ECO:0000313|EMBL:EXU87153.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
sw_7_scaffold_1182_5
Nannochloropsis gaditana, Nannochloropsis, Eustigmatales, Eustigmatophyceae, Eukaryota

Not on your lists

5147..5734
DNA (588bp) protein (196aa)
PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus RepID=D8LC91_ECTSI
Peptide chain release factor 3 {ECO:0000313|EMBL:EWM21881.1}; TaxID=72520 species="Eukaryota; Stramenopiles; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis.;" source="Nannochlorops
peptide chain release factor 3 (bRF-3)
sw_7_scaffold_1182_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5727..6710
DNA (984bp) protein (328aa)
Peptide chain release factor 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0W5_CONWI
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=469383 species="Bacteria; Actinobacteria; Thermole
sw_7_scaffold_1182_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6805..7908)
DNA (1104bp) protein (368aa)
exonuclease-like protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Conserved domain protein id=1263306 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
sw_7_scaffold_1182_8
unknown

Not on your lists

8684..9226
DNA (543bp) protein (181aa)

This feature has no annotations

sw_7_scaffold_1182_9
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9261..10208
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEA9_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:KGM12975.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16
hypothetical protein
sw_7_scaffold_1182_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10241..12088)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036E6311
peptide hydrolase
Peptide hydrolase {ECO:0000313|EMBL:AIJ26744.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
sw_7_scaffold_1182_11
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(12085..12552)
DNA (468bp) protein (156aa)
Phospholipid-binding protein, PBP family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXM2_METFV
phosphatidylethanolamine-binding protein; K06910 Tax=RBG_16_Caldithrix_48_16_curated
phospholipid-binding protein, pbp family
sw_7_scaffold_1182_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12768..13985)
DNA (1218bp) protein (406aa)
Aspartate transaminase n=1 Tax=Frankia sp. CN3 RepID=G6HEN8_9ACTO
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADP84226.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
sw_7_scaffold_1182_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14110..15006)
DNA (897bp) protein (299aa)
phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:ACZ00338.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ACZ00338.1};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Therm
phosphoserine phosphatase n=1 Tax=Nocardiopsis potens RepID=UPI0003481B54
sw_7_scaffold_1182_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

15543..16766
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036066EE
Colicin V production protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
serine protease
sw_7_scaffold_1182_15
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16774..18129)
DNA (1356bp) protein (452aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HCR1_STRA9
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KIE50883.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
3-deoxy-7-phosphoheptulonate synthase
sw_7_scaffold_1182_16
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18395..19054
DNA (660bp) protein (220aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase (EC:1.1.1.178)
3-hydroxyacyl-CoA dehydrogenase type-2 {ECO:0000313|EMBL:CCH77574.1}; EC=1.1.1.178 {ECO:0000313|EMBL:CCH77574.1};; EC=1.1.1.35 {ECO:0000313|EMBL:CCH77574.1};; TaxID=1194083 species="Bacteria; Actinoba
Putative 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VQG9_9MICO
sw_7_scaffold_1182_17
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18987..19565)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5G8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65988.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
sw_7_scaffold_1182_18
unknown

Not on your lists

comp(19894..20295)
DNA (402bp) protein (134aa)

This feature has no annotations

sw_7_scaffold_1182_19
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

20398..21276
DNA (879bp) protein (293aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8Y2_OCEP5
DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase
sw_7_scaffold_1182_20
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21290..21862)
DNA (573bp) protein (191aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8D1S0_9BACL
sw_7_scaffold_1182_21
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22158..22853
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI000376A44F
IclR family transcriptional regulator {ECO:0000313|EMBL:KHD97108.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
IclR family transcriptional regulator
sw_7_scaffold_1182_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22900..23214)
DNA (315bp) protein (105aa)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTD0_9EURY
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:ELZ25667.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
nadB; quinolinate synthase, B subunit (L-aspartate oxidase)
Displaying 23 items

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