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sw_7_scaffold_1555

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1555_1
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..591)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Candida albicans (strain SC5314 / ATCC MYA-2876) RepID=Q5AJY1_CANAL
hypothetical protein
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
sw_7_scaffold_1555_2
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

959..1657
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z110_9PROT
metal-dependent membrane protease
Tax=BJP_IG2102_Coriobacteriales_64_17
sw_7_scaffold_1555_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1742..2710
DNA (969bp) protein (323aa)
citrate (pro-3S)-lyase (EC:4.1.3.6)
Citrate (Pro-3S)-lyase {ECO:0000313|EMBL:ACZ91049.1}; EC=4.1.3.6 {ECO:0000313|EMBL:ACZ91049.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptospora
Citrate (Pro-3S)-lyase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0N7_STRRD
sw_7_scaffold_1555_4
unknown

Not on your lists

2744..3160
DNA (417bp) protein (139aa)

This feature has no annotations

sw_7_scaffold_1555_5
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2973..3740)
DNA (768bp) protein (256aa)
potassium transporter n=1 Tax=Streptomyces viridosporus RepID=UPI0001AF18F3
Potassium transporter {ECO:0000313|EMBL:AJE43163.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
putative sodium/proton antiporter
sw_7_scaffold_1555_6
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3834..4319)
DNA (486bp) protein (162aa)
potassium transporter TrkA n=1 Tax=Deinococcus wulumuqiensis RepID=UPI000344A22C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF10720.1}; TaxID=243230 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (s
sw_7_scaffold_1555_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4438..4932
DNA (495bp) protein (165aa)
MaoC domain protein dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP46_PSEUX
acyl dehydratase MaoC
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66737.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
sw_7_scaffold_1555_8
Micromonospora aurantiaca, Micromonospora, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4957..5595
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T3J8_MICAI
hypothetical protein
sw_7_scaffold_1555_9
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5592..6632)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI0003777AA2
Uncharacterized protein {ECO:0000313|EMBL:KDS87462.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces ros
hypothetical protein
sw_7_scaffold_1555_10
unknown

Not on your lists

comp(6586..6789)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_7_scaffold_1555_11
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6896..7204)
DNA (309bp) protein (103aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=unclassified Zetaproteobacteria RepID=UPI00035CE106
hypothetical protein Tax=RBG_13_Chloroflexi_54_9_curated
ThiS family protein
sw_7_scaffold_1555_12
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7292..8521)
DNA (1230bp) protein (410aa)
Threonine synthase {ECO:0000313|EMBL:KJF17986.1}; EC=4.2.3.1 {ECO:0000313|EMBL:KJF17986.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidi
Threonine synthase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5N2_THECD
threonine synthase
sw_7_scaffold_1555_trna_1
unknown

Not on your lists

8785..8857
DNA (73bp)
transferRNA
sw_7_scaffold_1555_13
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9272..10042
DNA (771bp) protein (257aa)
Zinc ABC transporter, periplasmic binding protein n=1 Tax=Cyanothece sp. (strain ATCC 51142) RepID=B1WVX6_CYAA5
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CG_Desulfarul_01
znuC; zinc ABC transporter periplasmic binding protein
sw_7_scaffold_1555_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10047..10754
DNA (708bp) protein (236aa)
ABC transporter related protein n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0J6_9BACT
Zinc ABC transporter, ATP-binding protein ZnuC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK34191.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. A
sw_7_scaffold_1555_15
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10720..11586
DNA (867bp) protein (289aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UP27_9DELT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EPR34083.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovib
membrane protein
sw_7_scaffold_1555_16
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12234..13028
DNA (795bp) protein (265aa)
Transcriptional regulator, XRE family n=1 Tax=Thermincola potens (strain JR) RepID=D5XF54_THEPJ
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADG82275.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (s
sw_7_scaffold_1555_17
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13782..14429)
DNA (648bp) protein (216aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8ILJ1_ALIAT
yjfH; TrmH family RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:AEJ44945.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicycloba
sw_7_scaffold_1555_18
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14500..14721)
DNA (222bp) protein (74aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYT8_9PLAN
cysteinyl-tRNA synthetase
sw_7_scaffold_1555_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14714..15736)
DNA (1023bp) protein (341aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=14625950 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cysteinyl-tRNA synthetase (EC:6.1.1.16)
sw_7_scaffold_1555_20
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15820..16317)
DNA (498bp) protein (166aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GVW3_9GAMM
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
sw_7_scaffold_1555_21
unknown

Not on your lists

comp(16322..16966)
DNA (645bp) protein (215aa)

This feature has no annotations

sw_7_scaffold_1555_22
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17056..17400
DNA (345bp) protein (115aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CJQ4_MYCTH
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
sw_7_scaffold_1555_23
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17426..17668
DNA (243bp) protein (81aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Saccharomonospora halophila RepID=UPI000374EB98
4-diphosphocytidyl-2-methyl-D-erythritol synthase
sw_7_scaffold_1555_24
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17626..18684)
DNA (1059bp) protein (353aa)
PilT protein domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQZ5_ACIC1
PilT domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ABK51855.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain
sw_7_scaffold_1555_25
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18765..19250)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UN63_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB47171.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104
CarD family transcriptional regulator
sw_7_scaffold_1555_26
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19438..20505)
DNA (1068bp) protein (356aa)
DNA integrity scanning protein DisA n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J8L9_FRASU
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-R
sw_7_scaffold_1555_27
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

comp(20692..21888)
DNA (1197bp) protein (399aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05568 multicomponent Na+:H+ antiporter subunit D Tax=RBG_16_Chloroflexi_48_7_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH/Ubiquinone/plastoquinone (Complex I) id=3514408 bin=GWC2_Syntrophus__56_31 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Displaying 28 items

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