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sw_7_scaffold_2264

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2264_1
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..168
DNA (168bp) protein (56aa)
Elongation factor Tu n=1 Tax=Streptomyces aureofaciens RepID=Q93T39_STRAU
tuf; putative elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales;
sw_7_scaffold_2264_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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363..674
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XNJ7_MICPN
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovor
sw_7_scaffold_2264_3
Propionibacterium sp. KPL1844, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


691..1332
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Propionibacterium sp. KPL1844 RepID=U7JLQ2_9ACTO
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1203573 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium
50S ribosomal protein L3
sw_7_scaffold_2264_4
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1332..2015
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000367A72D
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium ac
rplD; 50S ribosomal protein L4
sw_7_scaffold_2264_5
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2049..2339
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00037B30BD
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source
50S ribosomal protein L23
sw_7_scaffold_2264_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


2413..3246
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Actinopolymorpha alba RepID=UPI000382145A
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
50S ribosomal protein L2
sw_7_scaffold_2264_7
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


3278..3574
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2X6_ACIFD
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Actinobacteria_70_17_curated
30S ribosomal protein S19
sw_7_scaffold_2264_8
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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3623..4021
DNA (399bp) protein (133aa)
50S ribosomal protein L22 n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QB83_STANL
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="S
sw_7_scaffold_2264_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4025..5053
DNA (1029bp) protein (343aa)
30S ribosomal protein S3 n=1 Tax=Frankia sp. CN3 RepID=G6HER6_9ACTO
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
sw_7_scaffold_2264_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5138..5443
DNA (306bp) protein (102aa)
50S ribosomal protein L16 n=1 Tax=Nocardiopsis RepID=UPI00034836CB
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" s
rplP; 50S ribosomal protein L16
sw_7_scaffold_2264_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5430..5645
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKZ2_THEM7
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
sw_7_scaffold_2264_12
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5642..5929
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU70_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
30S ribosomal protein S17
sw_7_scaffold_2264_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists


6067..6435
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=14631263 bin=bin9_gal15 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=CSP1_3_Armatimonadetes
rplN; 50S ribosomal protein L14
sw_7_scaffold_2264_14

Not on your lists


6436..6774
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S03H2_L03098 {ECO:0000313|EMBL:GAH37602.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L24
50S ribosomal protein L24 id=4857433 bin=GWC2_Deltaproteobacteria_56_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
sw_7_scaffold_2264_15
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


6788..7369
DNA (582bp) protein (194aa)
50S ribosomal protein L5 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Y4_ACIFD
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferro
50S ribosomal protein L5
sw_7_scaffold_2264_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7466..7762
DNA (297bp) protein (99aa)
30S ribosomal protein S8 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2N5_CATAD
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (stra
sw_7_scaffold_2264_17
RBG_13_Firmicutes_65_8_curated, Firmicutes, Bacteria

Not on your lists


7790..8332
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SUP9_9FIRM
ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Firmicutes_65_8_curated
rplF; 50S ribosomal protein L6
sw_7_scaffold_2264_18
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists


8388..8744
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RL18_HERA2
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon au
sw_7_scaffold_2264_19
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8805..9383
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1EAG2_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Jan
30S ribosomal protein S5
sw_7_scaffold_2264_20
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


9376..9747
DNA (372bp) protein (124aa)
50S ribosomal protein L30 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZP3_CLOSW
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Actinobacteria_70_17_curated
50S ribosomal protein L30P
sw_7_scaffold_2264_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9744..10199
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXH6_SULAD
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae S
sw_7_scaffold_2264_22
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10239..10592
DNA (354bp) protein (118aa)
preprotein translocase subunit SecY n=1 Tax=Serinicoccus profundi RepID=UPI000255E662
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
Displaying 22 items

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