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sw_7_scaffold_2486

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2486_1
unknown

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comp(2..112)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_7_scaffold_2486_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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693..1178
DNA (486bp) protein (162aa)
prcB; 20S proteasome beta-type subunit (EC:3.4.25.1)
proteasome A-type and B-type Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Putative proteasome A-type and B-type id=4058799 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sw_7_scaffold_2486_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1237..1917
DNA (681bp) protein (227aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PrcA
Proteasome subunit alpha n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=PSA_NOCSJ
20S proteasome, A and B subunits
sw_7_scaffold_2486_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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2015..3370
DNA (1356bp) protein (452aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:
Pup--protein ligase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBI1_THEBD
hypothetical protein
sw_7_scaffold_2486_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(3436..5628)
DNA (2193bp) protein (731aa)
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=CG_Solirubrobact_01
penicillin-binding protein, 1A family (EC:2.4.2.- 3.4.-.-)
Penicillin-binding protein n=2 Tax=Megasphaera RepID=S7J1W4_9FIRM
sw_7_scaffold_2486_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5947..6927
DNA (981bp) protein (327aa)
DeoR family transcripitonal regulator n=1 Tax=Nonomuraea coxensis RepID=UPI000364C946
DeoR family transcripitonal regulator {ECO:0000313|EMBL:ETK37965.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
transcriptional regulator
sw_7_scaffold_2486_7
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6962..8086
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J9S1_FRASC
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:ETA01889.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Displaying 7 items

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