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sw_7_scaffold_809

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_809_1
Corynebacterium freneyi, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

191..829
DNA (639bp) protein (213aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=DEF_FRASN
sw_7_scaffold_809_2
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

842..1849
DNA (1008bp) protein (336aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1194083 species="
hypothetical protein n=1 Tax=Actinomyces timonensis RepID=UPI0002F4730F
methionyl-tRNA formyltransferase
sw_7_scaffold_809_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1846..3303
DNA (1458bp) protein (486aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
Sun protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJA6_THEM7
sun protein
sw_7_scaffold_809_4
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3635..4504
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037DC6C2
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukuba
riboflavin biosynthesis protein RibD
sw_7_scaffold_809_5
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4504..5187
DNA (684bp) protein (228aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Salinispora pacifica RepID=UPI000376CA02
Riboflavin synthase alpha chain {ECO:0000313|EMBL:GAB96505.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340
sw_7_scaffold_809_6

Not on your lists

5184..6503
DNA (1320bp) protein (440aa)
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=uncultured bacterium A1Q1_fos_862 RepID=L7VZM5_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1256590 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_
sw_7_scaffold_809_7
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6503..6961
DNA (459bp) protein (153aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Brevibacillus RepID=J2IDZ2_9BACL
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_7_scaffold_809_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7126..7371
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADY4_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99410.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (str
sw_7_scaffold_809_9
unknown

Not on your lists

7378..7536
DNA (159bp) protein (53aa)

This feature has no annotations

sw_7_scaffold_809_10
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7553..8338
DNA (786bp) protein (262aa)
Putative prepilin peptidase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZD5_ACTM4
putative prepilin peptidase
Putative prepilin peptidase {ECO:0000313|EMBL:BAL86122.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (st
sw_7_scaffold_809_11
unknown

Not on your lists

8393..8806
DNA (414bp) protein (138aa)

This feature has no annotations

sw_7_scaffold_809_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8953..9150
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZ89_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parv
rpmI; 50S ribosomal protein L35
sw_7_scaffold_809_13
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9205..9558
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DNY6_DESRL
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
sw_7_scaffold_809_14
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9588..10397
DNA (810bp) protein (270aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y1Z5_THEBD
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADG88751.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain
sw_7_scaffold_809_15
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10394..11455
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sou
histidine kinase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003753AB8
histidine kinase
sw_7_scaffold_809_16
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11498..12571
DNA (1074bp) protein (358aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHT3_9ACTO
sw_7_scaffold_809_17
unknown

Not on your lists

comp(12821..12961)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_7_scaffold_809_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13525..15093
DNA (1569bp) protein (523aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanine--tRNA ligase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Frankia sp. CN3 RepID=G6HP79_9ACTO
sw_7_scaffold_809_19
unknown

Not on your lists

comp(15132..15422)
DNA (291bp) protein (97aa)

This feature has no annotations

sw_7_scaffold_809_20
unknown

Not on your lists

16007..16219
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 20 items

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