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sw_7_scaffold_1095_6

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7363..10917)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 999.99
  • Bit_score: 1463
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 999.99
  • Bit_score: 1419
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287A434 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 999.99
  • Bit_score: 1463
  • Evalue 0.0

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3555
GTGCTGAACTCGCTGATCGCTTCCAATGCGCTGTCCGGAGGTCGCTGTCTTGTCGACGTCCCTCGACGCTCTCACGCCCTCTGCGGCCTCGAGGAGGTCTTTGCCGAGATCTCGCCGATCGAGGACTTCACCGGCCAGATGGCCTTGAGCTTCTCCGAGCACCGCTTCGAGGAGCCCAAGCACACCGAGGAGGAGTGCAAGGAGAAGGACCTGACCTACGCCGCGCCGCTGTTCGTCACCGCGGAGTTCGTCAACCGCTCCACCGGCGAGATCAAGTCCCAGACGGTCTTCATGGGCGACTTCCCGATGATGAGCGCCAACGGGACCTTCATCATCAACGGCACCGAGCGCATCGTCGTCAGTCAGCTGGTGCGCTCGCCGGGGGTGTACTTCAACTCCGTGCCCGAAAAGGCCACCCAGCGGCTGGTCCACGACTGCAAGGTGATCCCCTCGCGCGGGGCGTGGCTGGAGTTCGAGGTGGACAAGCGCGACATCGCGGGCGTGCGCGTGGACCGCAAGCGGCGCCAGCACCTCAGCGTGCTGTACCGCGCGCTCAAGGGCATCGTCTACAACCCGGACACGGGTGAGTACGAGCTGGCCGACAGCGACACCCTCGAGCAGGTCGTGGCCGACGAGGAGATCGCCAGCTTCTTTGACCATGCGCCCCAGGTCGAGGCGACCCTCGAGCGCGACACGCTGCAGACGCCGGCCGACGCGCTCATGGACATCTACCGCAAGCTGCGGCCCGGCGAGCCCCCGACGGTCGAGTCCGCCGGGGGGCTGCTGATCAACCTGTTCTTCAACGCCAAGCGCTACGACCTCGCCCGGGTGGGCCGCTACAAGGTCAACAAGAAGCTCGGCGAGGAGTTGGTGCGCTTGGGCCTGCGCCAGCTGGAGGAGGCCACCCCGCTGCGCGGCGCCGAGCCCGACACCCGCCTGCAGGCGGCGCTGGCCAACGGCGGCGACTACCGGTCGGTGGTGCTCAACGAGAGCGAGGTGCCCTCGCCGGCGTTCAGCCACATTCTCACCAAAGAGGACGTGCTGGCCACGATGAGCTATCTGGTGCGCCTGGCCCAGAGGCACGAGTCGTTCGAGATCGACGACATCGACCACTTCGGCAACCGGCGCCTGCGCAGCGTGGGCGAGCTGATCCAGAACCAGGTGCGCATCGGCCTGTCGCGCATGGAGCGGGTGGTCCGCGAGCGCATGACCACCCAGGACGTGGAGCAGATCACGCCGCAGTCGCTGATCAACATCCGCCCGGTGGTGGCCTCCATCAAGGAGTTCTTCGGCGCCAGCCAGCTCAGCCAGTTCATGGACCAGACCAACCCCGTGTCGGGGCTGACCCACAAGCGGCGTCTGAGCGCCCTGGGCCCCGGCGGGCTCAGCCGCGAGCGCGCCGGTTTCGAGGTCCGCGACGTCCACCCGTCCCACTACGGGCGCATGTGCCCCATCGAGACCCCGGAGGGGCCCAATATCGGGCTGATCGGCTCGCTGGCGACCTATGCGCGCATCAACGACTTCGGCTTCGTCGAGACTCCGTATCGCAAGGTCGTCGACGGTGAGGTCACCGAGCAGATCGACTACCTCACCGCCGACGAAGAGGACCGCATGGTCGTGGCCCAGGCCAACGCGCCGCTGGAGGACGACGACGGCTCAAACGAAGGCCGGCGGACCTTTGCCAACCCGATGGTGCTGTGCCGGGCCAAGCACGGTGAGGTCCGCGAGGTTCCCCCGGCTGAGGTCGACTACATGGACGTCAGCCCGCGGCAGATCGTCTCGGTGGCCGCGGCCATGATCCCGTTTTTGGAGCACGACGACGCCAACCGGGCGCTGATGGGCACCAACATGCAGCGCCAGGCGGTGCCGCTGCTGCGCAACACGGCGCCGTACGTCGGCACGGGCCTGGAGGCCAAGGCCGCCATCGACGCCGGTGACGTCGTCCAAGCCGAAAGCGACGGCGTGGTCGTGGAGGTCGCCGCCGATCGGATCATTATCAAGACCCACGACGAGCGCCTGGAGAAGCACTTCCTGCGCAAGTTCGAGCGCACCAACCAGGGCACCTGCTACAGCCAGCGGCCGCTGGCCGAAGAGGGCGACGAGGTCGTGCCGGGCCAGGTCATCGCCGACGGGCCGTGCAACGACCGCGGCGACATGGCGTTGGGCCAGAACCTGCTGGTGGCCTTCATGTCCTGGGAGGGCTTCAACTTCGAGGACGCGATCATCGTCTCCGAGCGCCTGGTCAAGGACGACGTGCTGACCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGCGACACCAAGCTCGGCCCCGAGGAGATCACCCGCGACATTCCCAACGTCGGCGAGGACATCCTGGCCAACCTCGACGAGCGCGGGATCATCCGCATCGGCGCGGAGGTTTCCCCGGGCGACGTGCTGGTGGGCAAGGTCACGCCCAAGGGTGAGACCGAGCTGACCCCCGAGGAGCGGCTGCTGCGGGCGATCTTCGGCGAGAAGGCGCGCGAGGTGCGCGACACCTCGCTGAAGGTCCCCCACGGCGAGAGCGGCCGCGTCATCGGGGTGCGCACGTTCTCGCGCGAGGACGGCGACGAGATGCCCCCCGGGGTCAACGAGCTCGTGCGCGTCTACGTGGCCCAGAAGCGCAAGATCTCCGATGGCGACAAGCTCGCCGGCCGCCACGGCAACAAGGGCGTGATCGCCAAGATCCTGCCCGAGGAGGACATGCCCTTCTTGGCCGACGGCACGCCGGTGGACATCGTGCTCAACCCCCTGGGGGTGCCCAGCCGCATGAACGTCGGTCAGGTGCTGGAGACCCACCTCGGCTGGGTGGCCAAGCAGGGGTGGCACTTCGACGAGACGCCCGAGTGGTTCGAGCGCCTGGGCTGGGACGCGACCATGCGCGAGCGCTCCGGCGATGGCCGGGTCAGCTCGCCGGTGTTCGACGGATGCAAGGAGGACGAGCTGATCGACCTGCTGGGCCATGCCAATCCCACCGGCGACGGCCAGCGGCTCATCGACGCCGACGGCAAGGCCCAGCTGATCGACGGGCGCAGCGGCGAGCCGATCGATCAGCCCACGACTGTGGGCTACATGTACATCCTCAAGCTGCTGCACCTGGTCGATGACAAGATCCACGCCCGCTCGACGGGGCCGTACTCGATGATCACCCAGCAGCCATTGGGCGGCAAGGCGCAGTTCGGCGGTCAGCGCTTCGGTGAGATGGAGGTGTGGGCGCTGGAGGCCTACGGCGCGTCCTACGCCCTCCAGGAGCTGCTGACGGTCAAAAGCGACGACGTCCTGGGCCGCGTCAAGGTCTACGAGGCGATCGTCAAGGGCGACAACATCCCCGAGCCCGGCATCCCCGAGTCGTTCAAGGTGCTGATCAAGGAGATGCAGAGCCTGTGCCTCAACGTCGAGGTTCTGTCGGCTGAGGGCCGCGAGATCGAGATGCGCGAGAGCGACGAGGACGCCTTCCGCGCCGCAGAGGAGCTGGGCATCGACCTGTCGCGCCCCGAGCGCGGCAGCGAGGATGTCGGACTGGGAAGCTAG
PROTEIN sequence
Length: 1185
VLNSLIASNALSGGRCLVDVPRRSHALCGLEEVFAEISPIEDFTGQMALSFSEHRFEEPKHTEEECKEKDLTYAAPLFVTAEFVNRSTGEIKSQTVFMGDFPMMSANGTFIINGTERIVVSQLVRSPGVYFNSVPEKATQRLVHDCKVIPSRGAWLEFEVDKRDIAGVRVDRKRRQHLSVLYRALKGIVYNPDTGEYELADSDTLEQVVADEEIASFFDHAPQVEATLERDTLQTPADALMDIYRKLRPGEPPTVESAGGLLINLFFNAKRYDLARVGRYKVNKKLGEELVRLGLRQLEEATPLRGAEPDTRLQAALANGGDYRSVVLNESEVPSPAFSHILTKEDVLATMSYLVRLAQRHESFEIDDIDHFGNRRLRSVGELIQNQVRIGLSRMERVVRERMTTQDVEQITPQSLINIRPVVASIKEFFGASQLSQFMDQTNPVSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSLATYARINDFGFVETPYRKVVDGEVTEQIDYLTADEEDRMVVAQANAPLEDDDGSNEGRRTFANPMVLCRAKHGEVREVPPAEVDYMDVSPRQIVSVAAAMIPFLEHDDANRALMGTNMQRQAVPLLRNTAPYVGTGLEAKAAIDAGDVVQAESDGVVVEVAADRIIIKTHDERLEKHFLRKFERTNQGTCYSQRPLAEEGDEVVPGQVIADGPCNDRGDMALGQNLLVAFMSWEGFNFEDAIIVSERLVKDDVLTSIHIEEHEVDARDTKLGPEEITRDIPNVGEDILANLDERGIIRIGAEVSPGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGRVIGVRTFSREDGDEMPPGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIAKILPEEDMPFLADGTPVDIVLNPLGVPSRMNVGQVLETHLGWVAKQGWHFDETPEWFERLGWDATMRERSGDGRVSSPVFDGCKEDELIDLLGHANPTGDGQRLIDADGKAQLIDGRSGEPIDQPTTVGYMYILKLLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGASYALQELLTVKSDDVLGRVKVYEAIVKGDNIPEPGIPESFKVLIKEMQSLCLNVEVLSAEGREIEMRESDEDAFRAAEELGIDLSRPERGSEDVGLGS*