ggKbase home page

sw_7_scaffold_1095

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1095_1
unknown

Not on your lists

1..309
DNA (309bp) protein (103aa)

This feature has no annotations

sw_7_scaffold_1095_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(203..2188)
DNA (1986bp) protein (662aa)
Elongation factor G n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D179_DESAJ
translation elongation factor G; K02355 elongation factor G Tax=RBG_16_Actinobacteria_68_21_curated
translation elongation factor 2 (EF-2/EF-G)
sw_7_scaffold_1095_3
Lactobacillus hokkaidonensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(2233..2703)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Lactobacillus parabrevis RepID=UPI000379FDEC
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1193095 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus hokkaidonens
sw_7_scaffold_1095_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2771..3142)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Streptomyces scabrisporus RepID=UPI0003674E8C
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (str
sw_7_scaffold_1095_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3276..7277)
DNA (4002bp) protein (1334aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta' n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F3U6_MODMB
sw_7_scaffold_1095_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7363..10917)
DNA (3555bp) protein (1185aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287A434
sw_7_scaffold_1095_7
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11232..11618)
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C909
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
rplL; 50S ribosomal protein L7/L12
sw_7_scaffold_1095_8
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11684..12292)
DNA (609bp) protein (203aa)
50S ribosomal protein L10 n=1 Tax=Frankia sp. BCU110501 RepID=UPI000365549D
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont
sw_7_scaffold_1095_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12528..13265)
DNA (738bp) protein (246aa)
50S ribosomal protein L1 n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3T0_9ACTO
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 1
sw_7_scaffold_1095_10
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13355..13720)
DNA (366bp) protein (122aa)
50S ribosomal protein L11 n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MFH3_BRAFD
50S ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="
sw_7_scaffold_1095_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13778..14746)
DNA (969bp) protein (323aa)
Transcription termination/antitermination protein NusG n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX88_9ACTN
nusG; transcription antitermination protein NusG
nusG; transcription antitermination protein NusG Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
sw_7_scaffold_1095_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14780..15067)
DNA (288bp) protein (96aa)
Protein translocase subunit SecE n=2 Tax=Amycolatopsis RepID=R4SWS4_AMYOR
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
secE; preprotein translocase subunit SecE
sw_7_scaffold_1095_trna_1
unknown

Not on your lists

comp(15129..15201)
DNA (73bp)
transferRNA
sw_7_scaffold_1095_13
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15353..15772)
DNA (420bp) protein (140aa)
MaoC domain protein dehydratase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KCD9_SACES
MaoC domain protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:CCH35192.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensi
sw_7_scaffold_1095_14
unknown

Not on your lists

comp(15772..16149)
DNA (378bp) protein (126aa)

This feature has no annotations

sw_7_scaffold_1095_15
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16334..16825)
DNA (492bp) protein (164aa)
Translation initiation factor IF-3 n=3 Tax=Veillonella RepID=C4FPN3_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillo
translation initiation factor IF-3
sw_7_scaffold_1095_16
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17074..17238)
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Streptomyces somaliensis RepID=UPI00029A352E
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1504318 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
50S ribosomal protein L33
sw_7_scaffold_1095_17
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17272..17439)
DNA (168bp) protein (56aa)
Elongation factor Tu n=1 Tax=Streptomyces aureofaciens RepID=Q93T39_STRAU
tuf; putative elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales;
Displaying 18 items

View Taxonomy