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sw_7_scaffold_1905_16

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 16902..17567

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE4_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 174.0
  • Bit_score: 108
  • Evalue 1.30e-20
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 174.0
  • Bit_score: 108
  • Evalue 3.50e-21
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABU60140.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 174.0
  • Bit_score: 108
  • Evalue 1.80e-20

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Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 666
GTGAGCGCTGGTCGTGGGGAGGCGGAGGCACCTCTTTTCTCCGACGACGTCGTCGAGGGCGTCAAGAACGGGGACCCGGATGCGGTCGGTGAGGTGTACGTGCGCCTGGCGGACCGTCTGCTGGGCTATCTCACCGCTCGCGTCCGCGACCGCGCCGCCGCCGAGGACCTGCTCGAGGCGACGTTCATCGAGCTGCTGCAAAAGGGCGGCACGATCCGGGGCGGCGCTGCGTCGATCAAGGTGTGGCTGTTCCGCGCCGCGTACTACAACGCGTTGGACTACCTGCGCAAGGTCAAGCGGCGCGGAGAGTGGCTCGAGGCCGACCTGACCCTGTTCGACCGCTGGGAGCCCGCCCGTGGACCGGCGGATCGCGCCGAGACCGACGACACGGTCAGCCGGGTGCGTGCGGCGATGGAGGCGTTGAGCGGCGAGCAGCGCCAGGTGCTGCTGCTGCGCTACGTGGCCGAGCTGACCGCCGCCGAGGTCGCCGAGGTCATGTCCAAGACCGACGGCGCCGTGCGCGCGCTGCAGCATCGAGGAGAGCGCGCCCTGGGCCGGTTGCTGCCGCTGCATGGCGTCCTCTCGTCTGTCGAGGAGGCCGCATCACCGGCCGAGGACGACGCGTCCGAGCGACACCAGGCCGCACGCGAGAACGGGCAGCGATGA
PROTEIN sequence
Length: 222
VSAGRGEAEAPLFSDDVVEGVKNGDPDAVGEVYVRLADRLLGYLTARVRDRAAAEDLLEATFIELLQKGGTIRGGAASIKVWLFRAAYYNALDYLRKVKRRGEWLEADLTLFDRWEPARGPADRAETDDTVSRVRAAMEALSGEQRQVLLLRYVAELTAAEVAEVMSKTDGAVRALQHRGERALGRLLPLHGVLSSVEEAASPAEDDASERHQAARENGQR*