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sw_7_scaffold_1905

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1905_1
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..185)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXJ9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ71953.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;"
hypothetical protein
sw_7_scaffold_1905_trna_1
unknown

Not on your lists

comp(308..382)
DNA (75bp)
transferRNA
sw_7_scaffold_1905_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1017..3899)
DNA (2883bp) protein (961aa)
Glycosyl transferase, family 51 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWG6_ACIC1
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
glycosyl transferase family protein
sw_7_scaffold_1905_3
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4048..5085)
DNA (1038bp) protein (346aa)
Anion-transporting ATPase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYL1_FRADG
anion-transporting ATPase
Anion-transporting ATPase {ECO:0000313|EMBL:AEH11579.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
sw_7_scaffold_1905_4
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5223..6197)
DNA (975bp) protein (325aa)
ATPase n=1 Tax=Saccharomonospora halophila RepID=UPI0003750904
Anion-transporting ATPase {ECO:0000313|EMBL:EFC84466.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
Anion-transporting ATPase
sw_7_scaffold_1905_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6309..7745
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4X1_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39288.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
sw_7_scaffold_1905_6
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7925..8209
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA015-M09 RepID=UPI0003635F2B
WhiB family transcriptional regulator Tax=RBG_16_Actinobacteria_70_17_curated
WhiB family cell cycle control transcriptional regulator
sw_7_scaffold_1905_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8232..8696
DNA (465bp) protein (155aa)
L-PSP family endoribonuclease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000310BAA3
Endoribonuclease L-PSP {ECO:0000313|EMBL:EKF43765.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
endoribonuclease L-PSP
sw_7_scaffold_1905_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8741..10612)
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI000370AA51
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
translation elongation factor
sw_7_scaffold_1905_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10687..11343
DNA (657bp) protein (219aa)
Methyltransferase type 11 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CHV7_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELZ22213.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
hypothetical protein
sw_7_scaffold_1905_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11381..11686)
DNA (306bp) protein (102aa)
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RBG_16_Anaeromyxobacter_69_14_curated
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA selenium transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B3374E
sw_7_scaffold_1905_11
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12475..13662)
DNA (1188bp) protein (396aa)
Acyl-CoA dehydrogenase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D6I6_9PSEU
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_61_14_curated
Acyl-CoA dehydrogenase domain protein
sw_7_scaffold_1905_12
unknown

Not on your lists

14058..14558
DNA (501bp) protein (167aa)

This feature has no annotations

sw_7_scaffold_1905_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14584..15312)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037680F8
anti-sigma K factor RskA
Anti-sigma K factor RskA {ECO:0000313|EMBL:AIJ25760.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;
sw_7_scaffold_1905_14
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15309..15923)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034B22C8
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative RNA polymerase ECF-subfamily sigma factor
sw_7_scaffold_1905_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16308..16745)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5G8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65988.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
sw_7_scaffold_1905_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16902..17567
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE4_ROSCS
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABU60140.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;"
sw_7_scaffold_1905_17
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17564..18721
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036689AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35380.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 /
sw_7_scaffold_1905_18
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18556..21993)
DNA (3438bp) protein (1146aa)
Methionine synthase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WF66_9ACTO
Methionine synthase {ECO:0000313|EMBL:EFL27376.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;
methionine synthase
sw_7_scaffold_1905_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22346..23536)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q834_CATAD
sw_7_scaffold_1905_20
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24344..25099
DNA (756bp) protein (252aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DID3_9CHRO
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERN40359.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Ru
type 12 methyltransferase
sw_7_scaffold_1905_21
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25119..26006
DNA (888bp) protein (296aa)
Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0G0_9PROT
Putative sarcosine-dimethylglycine methyltransferase {ECO:0000313|EMBL:EDP62215.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
type 11 methyltransferase
sw_7_scaffold_1905_22
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26162..27466
DNA (1305bp) protein (435aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGX1_TISMK
ahcY; S-adenosyl-L-homocysteine hydrolase
sw_7_scaffold_1905_23
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28089..28358
DNA (270bp) protein (90aa)
Putative PfkB-family carbohydrate kinase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0U4_ACTM4
putative PfkB-family carbohydrate kinase
Putative PfkB-family carbohydrate kinase {ECO:0000313|EMBL:BAL86631.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes miss
sw_7_scaffold_1905_24
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

28401..29282
DNA (882bp) protein (294aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZP0_9ACTN
Tax=BJP_IG2069_Chloroflexi_70_12
sw_7_scaffold_1905_25
unknown

Not on your lists

29524..29619
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 26 items

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