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sw_7_scaffold_11001

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Displaying 7 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_11001_1
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..478)
DNA (477bp) protein (159aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
Wyosine base formation domain-containing protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9Z7_HALXS
Wyosine base formation domain-containing protein
sw_7_scaffold_11001_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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612..1340
DNA (729bp) protein (243aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=268739 species="Archaea; Eurya
Arginine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNN6_NATM8
sw_7_scaffold_11001_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1517..2242
DNA (726bp) protein (242aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=931277 species="Archaea; Eurya
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUD4_HALMO
Suspect SCG annotation. See neighboring gene [sw_7_scaffold_11001_2].
sw_7_scaffold_11001_4
unknown

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comp(2243..2386)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_7_scaffold_11001_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3271..3684
DNA (414bp) protein (138aa)
Peptide chain release factor subunit 1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=RF1_HALLT
peptide chain release factor 1
Peptide chain release factor subunit 1 {ECO:0000255|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000255|HAMAP-Rule:MF_00424}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacte
sw_7_scaffold_11001_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3778..4347)
DNA (570bp) protein (190aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW61_HALBP
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:ADQ69281.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
sw_7_scaffold_11001_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4513..4827
DNA (315bp) protein (105aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJB5_HALAR
Displaying 7 items

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