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sw_7_scaffold_1978

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1978_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

sw_7_scaffold_1978_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(165..872)
DNA (708bp) protein (236aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halor
Endonuclease NucS n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPQ9_HALUD
hypothetical protein
sw_7_scaffold_1978_3
unknown

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comp(901..1482)
DNA (582bp) protein (194aa)

This feature has no annotations

sw_7_scaffold_1978_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1556..2140
DNA (585bp) protein (195aa)
Regulatory protein TetR n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQW2_HALMO
Regulatory protein TetR {ECO:0000313|EMBL:EMA48107.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
transcriptional regulator
sw_7_scaffold_1978_5
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2131..2529)
DNA (399bp) protein (133aa)
YphA family protein id=24618802 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Putative membrane protein {ECO:0000313|EMBL:ERH06410.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_7_scaffold_1978_6
unknown

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comp(2554..2664)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_7_scaffold_1978_7

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2775..3002
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZW92_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07195.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_7_scaffold_1978_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3120..3782)
DNA (663bp) protein (221aa)
50S ribosomal protein L15e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL15E_NATPD
rpl15R; 50S ribosomal protein L15e
50S ribosomal protein L15e {ECO:0000255|HAMAP-Rule:MF_00256}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_7_scaffold_1978_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3852..5225)
DNA (1374bp) protein (458aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRM4_HALUD
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ACV11960.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
sw_7_scaffold_1978_10
unknown

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5334..5486
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 10 items

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